Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 TSPY9P-201ENST00000440215 945 ntBASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 TSPY11P-201ENST00000442607 1045 ntBASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 MIR3181-201ENST00000578512 73 ntBASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRUB1Q8WWH5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRUB1Q8WWH5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRUB1Q8WWH5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.63
TRUB1Q8WWH5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 AC239859.2-201ENST00000444165 318 ntBASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 AC099791.2-201ENST00000605725 427 ntBASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRUB1Q8WWH5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB1Q8WWH5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19■□□□□ 0.63
TRUB1Q8WWH5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB1Q8WWH5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
TRUB1Q8WWH5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms