Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 AC103724.3-201ENST00000564481 992 ntBASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SMIM4Q8WVI0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMIM4Q8WVI0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
SMIM4Q8WVI0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMIM4Q8WVI0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SMIM4Q8WVI0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMIM4Q8WVI0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMIM4Q8WVI0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 FP700111.2-201ENST00000619190 1892 ntBASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 AC004987.1-201ENST00000428627 508 ntBASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 AC241377.3-202ENST00000626088 1088 ntBASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 AC241585.3-202ENST00000628937 1088 ntBASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 AC245100.8-202ENST00000629247 1058 ntBASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 TCF3P1-201ENST00000423021 1937 ntBASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SMIM4Q8WVI0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM4Q8WVI0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 AC103834.1-201ENST00000520383 144 ntBASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 NTF6A-201ENST00000591175 560 ntBASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SMIM4Q8WVI0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 AP006587.3-201ENST00000525742 1516 ntBASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms