Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 AIRN-201ENST00000601203 4374 ntBASIC18.67■□□□□ 0.58
SNX33Q8WV41 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.67■□□□□ 0.58
SNX33Q8WV41 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX33Q8WV41 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 MIR572-201ENST00000384983 95 ntBASIC18.66■□□□□ 0.58
SNX33Q8WV41 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX33Q8WV41 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SNX33Q8WV41 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNX33Q8WV41 AP006587.3-201ENST00000525742 1516 ntBASIC18.65■□□□□ 0.58
SNX33Q8WV41 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNX33Q8WV41 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX33Q8WV41 AL358852.1-201ENST00000623174 1268 ntBASIC18.65■□□□□ 0.58
SNX33Q8WV41 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.65■□□□□ 0.58
SNX33Q8WV41 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX33Q8WV41 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SNX33Q8WV41 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNX33Q8WV41 RNF165-205ENST00000588679 2904 ntBASIC18.64■□□□□ 0.58
SNX33Q8WV41 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.64■□□□□ 0.58
SNX33Q8WV41 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SNX33Q8WV41 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX33Q8WV41 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.64■□□□□ 0.57
SNX33Q8WV41 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX33Q8WV41 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.64■□□□□ 0.57
SNX33Q8WV41 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.64■□□□□ 0.57
SNX33Q8WV41 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX33Q8WV41 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SNX33Q8WV41 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX33Q8WV41 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms