Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 AC092865.7-201ENST00000641832 219 ntBASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL22A1Q8NFW1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
COL22A1Q8NFW1 AC137767.1-201ENST00000602918 1920 ntBASIC28.2■■■□□ 2.11
COL22A1Q8NFW1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC28.2■■■□□ 2.11
COL22A1Q8NFW1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
COL22A1Q8NFW1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
COL22A1Q8NFW1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
COL22A1Q8NFW1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC28.2■■■□□ 2.1
COL22A1Q8NFW1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
COL22A1Q8NFW1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC28.19■■■□□ 2.1
COL22A1Q8NFW1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
COL22A1Q8NFW1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
COL22A1Q8NFW1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
COL22A1Q8NFW1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
COL22A1Q8NFW1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC28.17■■■□□ 2.1
COL22A1Q8NFW1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
COL22A1Q8NFW1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
COL22A1Q8NFW1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL22A1Q8NFW1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 AL049597.2-201ENST00000565575 961 ntBASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL22A1Q8NFW1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC28.15■■■□□ 2.1
COL22A1Q8NFW1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC28.14■■■□□ 2.1
COL22A1Q8NFW1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC28.14■■■□□ 2.1
COL22A1Q8NFW1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC28.14■■■□□ 2.1
COL22A1Q8NFW1 AC026471.5-201ENST00000615068 467 ntBASIC28.14■■■□□ 2.1
COL22A1Q8NFW1 MIR6786-201ENST00000616843 113 ntBASIC28.14■■■□□ 2.1
COL22A1Q8NFW1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL22A1Q8NFW1 AC003102.1-202ENST00000563394 1796 ntBASIC28.14■■■□□ 2.1
COL22A1Q8NFW1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
COL22A1Q8NFW1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms