Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC026310.3-201ENST00000625186 2373 ntBASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 AL049796.1-201ENST00000565336 1766 ntBASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 AC068338.2-201ENST00000563278 1430 ntBASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 AC005181.1-201ENST00000604782 1256 ntBASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRAM1L1Q8N609 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 CROCCP5-201ENST00000436658 830 ntBASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAM1L1Q8N609 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.58■□□□□ 0.89
TRAM1L1Q8N609 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAM1L1Q8N609 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAM1L1Q8N609 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAM1L1Q8N609 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAM1L1Q8N609 MIR663A-201ENST00000385250 93 ntBASIC20.58■□□□□ 0.89
TRAM1L1Q8N609 CDV3P1-201ENST00000471403 739 ntBASIC20.58■□□□□ 0.89
TRAM1L1Q8N609 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAM1L1Q8N609 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAM1L1Q8N609 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.58■□□□□ 0.88
TRAM1L1Q8N609 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAM1L1Q8N609 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAM1L1Q8N609 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 CYP2T1P-201ENST00000432607 1285 ntBASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAM1L1Q8N609 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 AC006970.2-201ENST00000450065 779 ntBASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 AC116050.2-201ENST00000612102 1779 ntBASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAM1L1Q8N609 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAM1L1Q8N609 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms