Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
VPS8Q8N3P4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
VPS8Q8N3P4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
VPS8Q8N3P4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
VPS8Q8N3P4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC32.72■■■□□ 2.83
VPS8Q8N3P4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
VPS8Q8N3P4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
VPS8Q8N3P4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
VPS8Q8N3P4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
VPS8Q8N3P4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC32.71■■■□□ 2.83
VPS8Q8N3P4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC32.71■■■□□ 2.83
VPS8Q8N3P4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
VPS8Q8N3P4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
VPS8Q8N3P4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
VPS8Q8N3P4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC32.71■■■□□ 2.83
VPS8Q8N3P4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
VPS8Q8N3P4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
VPS8Q8N3P4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
VPS8Q8N3P4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC32.7■■■□□ 2.83
VPS8Q8N3P4 CDV3P1-201ENST00000471403 739 ntBASIC32.7■■■□□ 2.83
VPS8Q8N3P4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC32.7■■■□□ 2.83
VPS8Q8N3P4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
VPS8Q8N3P4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
VPS8Q8N3P4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.82
VPS8Q8N3P4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC32.7■■■□□ 2.82
VPS8Q8N3P4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC32.7■■■□□ 2.82
VPS8Q8N3P4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.82
VPS8Q8N3P4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 MIPEPP3-201ENST00000412105 444 ntBASIC32.69■■■□□ 2.82
VPS8Q8N3P4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 AC008694.1-202ENST00000636953 945 ntBASIC32.69■■■□□ 2.82
VPS8Q8N3P4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
VPS8Q8N3P4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 AC069152.1-201ENST00000438030 544 ntBASIC32.68■■■□□ 2.82
VPS8Q8N3P4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 AC092118.2-201ENST00000613495 667 ntBASIC32.68■■■□□ 2.82
VPS8Q8N3P4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 WWC2-AS2-201ENST00000578387 2183 ntBASIC32.68■■■□□ 2.82
VPS8Q8N3P4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 AC073210.2-201ENST00000430369 194 ntBASIC32.68■■■□□ 2.82
VPS8Q8N3P4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC32.68■■■□□ 2.82
VPS8Q8N3P4 AC116050.2-201ENST00000612102 1779 ntBASIC32.67■■■□□ 2.82
VPS8Q8N3P4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
VPS8Q8N3P4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
VPS8Q8N3P4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
VPS8Q8N3P4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC32.67■■■□□ 2.82
VPS8Q8N3P4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC32.67■■■□□ 2.82
VPS8Q8N3P4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC32.67■■■□□ 2.82
VPS8Q8N3P4 AC100791.3-201ENST00000617619 330 ntBASIC32.67■■■□□ 2.82
VPS8Q8N3P4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
VPS8Q8N3P4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
VPS8Q8N3P4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
VPS8Q8N3P4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
VPS8Q8N3P4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
VPS8Q8N3P4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC32.66■■■□□ 2.82
VPS8Q8N3P4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
VPS8Q8N3P4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
VPS8Q8N3P4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
VPS8Q8N3P4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
VPS8Q8N3P4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 APTR-205ENST00000447009 902 ntTSL 2 BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 CYP21A1P-202ENST00000354927 1481 ntBASIC32.65■■■□□ 2.82
VPS8Q8N3P4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
VPS8Q8N3P4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
VPS8Q8N3P4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC32.64■■■□□ 2.82
VPS8Q8N3P4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
VPS8Q8N3P4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC32.64■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms