Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC30■■■□□ 2.39
UBR1Q8IWV7 TSPY15P-201ENST00000457163 923 ntBASIC30■■■□□ 2.39
UBR1Q8IWV7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC30■■■□□ 2.39
UBR1Q8IWV7 AL445228.2-201ENST00000605589 952 ntBASIC30■■■□□ 2.39
UBR1Q8IWV7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
UBR1Q8IWV7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC30■■■□□ 2.39
UBR1Q8IWV7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
UBR1Q8IWV7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
UBR1Q8IWV7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
UBR1Q8IWV7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 MIR4785-201ENST00000585005 73 ntBASIC29.99■■■□□ 2.39
UBR1Q8IWV7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
UBR1Q8IWV7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 RN7SL850P-201ENST00000579959 291 ntBASIC29.98■■■□□ 2.39
UBR1Q8IWV7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC29.98■■■□□ 2.39
UBR1Q8IWV7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
UBR1Q8IWV7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 TK2-213ENST00000563369 882 ntTSL 5 BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC29.96■■■□□ 2.39
UBR1Q8IWV7 KRT17P2-201ENST00000300992 1314 ntBASIC29.96■■■□□ 2.39
UBR1Q8IWV7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
UBR1Q8IWV7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
UBR1Q8IWV7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
UBR1Q8IWV7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.95■■■□□ 2.39
UBR1Q8IWV7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
UBR1Q8IWV7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.38
UBR1Q8IWV7 PENK-204ENST00000518770 863 ntTSL 2 BASIC29.95■■■□□ 2.38
UBR1Q8IWV7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
UBR1Q8IWV7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
UBR1Q8IWV7 AC087633.2-202ENST00000565166 1439 ntBASIC29.94■■■□□ 2.38
UBR1Q8IWV7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
UBR1Q8IWV7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
UBR1Q8IWV7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC29.94■■■□□ 2.38
UBR1Q8IWV7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC29.94■■■□□ 2.38
UBR1Q8IWV7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC29.94■■■□□ 2.38
UBR1Q8IWV7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC29.93■■■□□ 2.38
UBR1Q8IWV7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC29.93■■■□□ 2.38
UBR1Q8IWV7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
UBR1Q8IWV7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
UBR1Q8IWV7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC29.93■■■□□ 2.38
UBR1Q8IWV7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
UBR1Q8IWV7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
UBR1Q8IWV7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
UBR1Q8IWV7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 AL023875.1-201ENST00000640777 796 ntBASIC29.92■■■□□ 2.38
UBR1Q8IWV7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
UBR1Q8IWV7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC29.91■■■□□ 2.38
UBR1Q8IWV7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms