Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.95■■□□□ 1.11
SCN4BQ8IWT1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SCN4BQ8IWT1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 MIPEPP3-201ENST00000412105 444 ntBASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 AL512625.2-201ENST00000417533 625 ntBASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 CDV3P1-201ENST00000471403 739 ntBASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 AC098934.4-201ENST00000564127 592 ntBASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
SCN4BQ8IWT1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.93■■□□□ 1.1
SCN4BQ8IWT1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 BX276092.2-201ENST00000417668 665 ntBASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCN4BQ8IWT1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 AC069152.1-201ENST00000438030 544 ntBASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 AC133041.1-202ENST00000642053 222 ntBASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCN4BQ8IWT1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 AC010980.2-201ENST00000587099 1412 ntBASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 MIR4758-201ENST00000577688 71 ntBASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCN4BQ8IWT1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.89■■□□□ 1.1
SCN4BQ8IWT1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCN4BQ8IWT1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms