Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VRK2Q86Y07 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VRK2Q86Y07 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VRK2Q86Y07 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VRK2Q86Y07 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.2■□□□□ 0.66
VRK2Q86Y07 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.2■□□□□ 0.66
VRK2Q86Y07 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.2■□□□□ 0.66
VRK2Q86Y07 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK2Q86Y07 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VRK2Q86Y07 LINC01521-201ENST00000504184 1943 ntBASIC19.19■□□□□ 0.66
VRK2Q86Y07 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VRK2Q86Y07 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
VRK2Q86Y07 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.19■□□□□ 0.66
VRK2Q86Y07 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VRK2Q86Y07 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VRK2Q86Y07 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VRK2Q86Y07 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VRK2Q86Y07 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.18■□□□□ 0.66
VRK2Q86Y07 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.18■□□□□ 0.66
VRK2Q86Y07 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 AC008175.2-201ENST00000612840 297 ntBASIC19.18■□□□□ 0.66
VRK2Q86Y07 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.18■□□□□ 0.66
VRK2Q86Y07 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VRK2Q86Y07 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.18■□□□□ 0.66
VRK2Q86Y07 AC092667.1-201ENST00000434301 2586 ntBASIC19.18■□□□□ 0.66
VRK2Q86Y07 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK2Q86Y07 LINC02228-203ENST00000641970 1355 ntBASIC19.18■□□□□ 0.66
VRK2Q86Y07 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.17■□□□□ 0.66
VRK2Q86Y07 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.17■□□□□ 0.66
VRK2Q86Y07 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VRK2Q86Y07 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.17■□□□□ 0.66
VRK2Q86Y07 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.17■□□□□ 0.66
VRK2Q86Y07 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.17■□□□□ 0.66
VRK2Q86Y07 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.17■□□□□ 0.66
VRK2Q86Y07 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VRK2Q86Y07 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.16■□□□□ 0.66
VRK2Q86Y07 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.16■□□□□ 0.66
VRK2Q86Y07 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.16■□□□□ 0.66
VRK2Q86Y07 AC138907.5-202ENST00000569484 235 ntBASIC19.16■□□□□ 0.66
VRK2Q86Y07 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.16■□□□□ 0.66
VRK2Q86Y07 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VRK2Q86Y07 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
VRK2Q86Y07 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK2Q86Y07 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK2Q86Y07 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
VRK2Q86Y07 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VRK2Q86Y07 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK2Q86Y07 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VRK2Q86Y07 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK2Q86Y07 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.15■□□□□ 0.66
VRK2Q86Y07 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK2Q86Y07 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK2Q86Y07 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms