Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC027702.1-201ENST00000563810 1770 ntBASIC18.74■□□□□ 0.59
SHFQ7M4L6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.74■□□□□ 0.59
SHFQ7M4L6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SHFQ7M4L6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SHFQ7M4L6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.74■□□□□ 0.59
SHFQ7M4L6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.74■□□□□ 0.59
SHFQ7M4L6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.74■□□□□ 0.59
SHFQ7M4L6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHFQ7M4L6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.74■□□□□ 0.59
SHFQ7M4L6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.73■□□□□ 0.59
SHFQ7M4L6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SHFQ7M4L6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.73■□□□□ 0.59
SHFQ7M4L6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SHFQ7M4L6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SHFQ7M4L6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHFQ7M4L6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.73■□□□□ 0.59
SHFQ7M4L6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SHFQ7M4L6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
SHFQ7M4L6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.72■□□□□ 0.59
SHFQ7M4L6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SHFQ7M4L6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.72■□□□□ 0.59
SHFQ7M4L6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SHFQ7M4L6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.72■□□□□ 0.59
SHFQ7M4L6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SHFQ7M4L6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHFQ7M4L6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.71■□□□□ 0.59
SHFQ7M4L6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.71■□□□□ 0.59
SHFQ7M4L6 AC112907.3-201ENST00000577781 2400 ntBASIC18.71■□□□□ 0.59
SHFQ7M4L6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SHFQ7M4L6 UNC93B3-201ENST00000308076 687 ntBASIC18.71■□□□□ 0.59
SHFQ7M4L6 MIR4767-201ENST00000582827 78 ntBASIC18.71■□□□□ 0.59
SHFQ7M4L6 AC233992.3-201ENST00000607491 485 ntBASIC18.71■□□□□ 0.59
SHFQ7M4L6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.71■□□□□ 0.59
SHFQ7M4L6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.71■□□□□ 0.59
SHFQ7M4L6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.71■□□□□ 0.59
SHFQ7M4L6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHFQ7M4L6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.71■□□□□ 0.58
SHFQ7M4L6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SHFQ7M4L6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.7■□□□□ 0.58
SHFQ7M4L6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.7■□□□□ 0.58
SHFQ7M4L6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHFQ7M4L6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 SMUG1P1-201ENST00000590640 811 ntBASIC18.7■□□□□ 0.58
SHFQ7M4L6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.7■□□□□ 0.58
SHFQ7M4L6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.7■□□□□ 0.58
SHFQ7M4L6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHFQ7M4L6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHFQ7M4L6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms