Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL54Q6P161 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL54Q6P161 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MRPL54Q6P161 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 GPX1-201ENST00000419349 1106 ntBASIC15.69■□□□□ 0.1
MRPL54Q6P161 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MRPL54Q6P161 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL54Q6P161 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
MRPL54Q6P161 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.68■□□□□ 0.1
MRPL54Q6P161 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.68■□□□□ 0.1
MRPL54Q6P161 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MRPL54Q6P161 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MRPL54Q6P161 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL54Q6P161 AC020907.5-201ENST00000624372 1936 ntBASIC15.68■□□□□ 0.1
MRPL54Q6P161 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.68■□□□□ 0.1
MRPL54Q6P161 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.68■□□□□ 0.1
MRPL54Q6P161 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.68■□□□□ 0.1
MRPL54Q6P161 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPL54Q6P161 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPL54Q6P161 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPL54Q6P161 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPL54Q6P161 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 BX323043.1-201ENST00000641006 1765 ntBASIC15.67■□□□□ 0.1
MRPL54Q6P161 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPL54Q6P161 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.67■□□□□ 0.1
MRPL54Q6P161 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
MRPL54Q6P161 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPL54Q6P161 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MRPL54Q6P161 AC116562.4-201ENST00000641316 2276 ntBASIC15.66■□□□□ 0.1
MRPL54Q6P161 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPL54Q6P161 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL54Q6P161 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPL54Q6P161 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MRPL54Q6P161 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL54Q6P161 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.65■□□□□ 0.1
MRPL54Q6P161 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MRPL54Q6P161 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.65■□□□□ 0.1
MRPL54Q6P161 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.65■□□□□ 0.1
MRPL54Q6P161 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL54Q6P161 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL54Q6P161 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL54Q6P161 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL54Q6P161 AC079089.2-201ENST00000531211 1277 ntBASIC15.65■□□□□ 0.1
MRPL54Q6P161 THA1P-201ENST00000590384 1145 ntBASIC15.65■□□□□ 0.1
MRPL54Q6P161 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL54Q6P161 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MRPL54Q6P161 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms