Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 AL592295.1-201ENST00000400984 884 ntBASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.75■□□□□ 0.11
CDPF1Q6NVV7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 AL356441.2-201ENST00000443009 864 ntBASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 KRT125P-201ENST00000546827 989 ntBASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 AC139713.2-201ENST00000641328 2723 ntBASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDPF1Q6NVV7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.73■□□□□ 0.11
CDPF1Q6NVV7 TNRC18P3-201ENST00000441896 2691 ntBASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 BX664725.1-201ENST00000438252 379 ntBASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 AC239859.2-201ENST00000444165 318 ntBASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDPF1Q6NVV7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms