Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 PKD1P6-201ENST00000343738 4769 ntBASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
PPP4R3AQ6IN85 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PPP4R3AQ6IN85 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
PPP4R3AQ6IN85 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PPP4R3AQ6IN85 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PPP4R3AQ6IN85 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 AC004911.1-201ENST00000416316 871 ntBASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 AC245052.3-201ENST00000450182 901 ntBASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 DUX4L16-201ENST00000555130 1264 ntBASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.64■■□□□ 1.37
PPP4R3AQ6IN85 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 AL049796.1-201ENST00000565336 1766 ntBASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 TERF1P5-201ENST00000477545 1207 ntBASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R3AQ6IN85 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.62■■□□□ 1.37
PPP4R3AQ6IN85 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3AQ6IN85 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3AQ6IN85 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3AQ6IN85 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R3AQ6IN85 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.62■■□□□ 1.37
PPP4R3AQ6IN85 AC007375.3-201ENST00000600936 2314 ntBASIC23.62■■□□□ 1.37
PPP4R3AQ6IN85 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.62■■□□□ 1.37
PPP4R3AQ6IN85 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R3AQ6IN85 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 AC080038.1-201ENST00000611274 1154 ntBASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PPP4R3AQ6IN85 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 CNN2P6-201ENST00000439038 900 ntBASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 AC007322.4-201ENST00000509611 723 ntBASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms