Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 AC242852.2-201ENST00000615738 1807 ntBASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 AC092368.3-202ENST00000574180 1591 ntBASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CCDC18Q5T9S5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CCDC18Q5T9S5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC32.37■■■□□ 2.77
CCDC18Q5T9S5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CCDC18Q5T9S5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CCDC18Q5T9S5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC18Q5T9S5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC18Q5T9S5 AL158047.1-201ENST00000445918 881 ntBASIC32.36■■■□□ 2.77
CCDC18Q5T9S5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
CCDC18Q5T9S5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC18Q5T9S5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC32.36■■■□□ 2.77
CCDC18Q5T9S5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC32.36■■■□□ 2.77
CCDC18Q5T9S5 AC116050.2-201ENST00000612102 1779 ntBASIC32.36■■■□□ 2.77
CCDC18Q5T9S5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 UNC93B4-201ENST00000505679 747 ntBASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 USP36-216ENST00000589424 970 ntTSL 5 BASIC32.35■■■□□ 2.77
CCDC18Q5T9S5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 AC069544.1-201ENST00000609399 999 ntBASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC32.34■■■□□ 2.77
CCDC18Q5T9S5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 AL359736.2-201ENST00000621992 437 ntBASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 AP006294.2-201ENST00000641667 209 ntBASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC32.33■■■□□ 2.77
CCDC18Q5T9S5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
CCDC18Q5T9S5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 HES2-205ENST00000487437 968 ntTSL 3 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CCDC18Q5T9S5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 SOX15-203ENST00000570788 1093 ntBASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CCDC18Q5T9S5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC32.3■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms