Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.46■□□□□ 0.71
CACNA1BQ00975 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1BQ00975 HMGN1P19-201ENST00000436976 333 ntBASIC19.46■□□□□ 0.71
CACNA1BQ00975 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1BQ00975 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.46■□□□□ 0.71
CACNA1BQ00975 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CACNA1BQ00975 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1BQ00975 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CACNA1BQ00975 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1BQ00975 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CACNA1BQ00975 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1BQ00975 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1BQ00975 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.45■□□□□ 0.7
CACNA1BQ00975 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1BQ00975 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CACNA1BQ00975 RN7SL510P-201ENST00000581311 263 ntBASIC19.45■□□□□ 0.7
CACNA1BQ00975 AC022898.2-201ENST00000616822 1312 ntBASIC19.45■□□□□ 0.7
CACNA1BQ00975 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1BQ00975 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1BQ00975 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1BQ00975 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1BQ00975 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CACNA1BQ00975 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CACNA1BQ00975 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1BQ00975 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CACNA1BQ00975 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1BQ00975 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.44■□□□□ 0.7
CACNA1BQ00975 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1BQ00975 OR7E47P-201ENST00000546390 1422 ntBASIC19.44■□□□□ 0.7
CACNA1BQ00975 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1BQ00975 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CACNA1BQ00975 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1BQ00975 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1BQ00975 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1BQ00975 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1BQ00975 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1BQ00975 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1BQ00975 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1BQ00975 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1BQ00975 KRT8P45-201ENST00000414328 1447 ntBASIC19.42■□□□□ 0.7
CACNA1BQ00975 AC079630.1-202ENST00000618127 1840 ntBASIC19.42■□□□□ 0.7
CACNA1BQ00975 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 AP000525.1-201ENST00000608286 694 ntBASIC19.42■□□□□ 0.7
CACNA1BQ00975 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1BQ00975 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA1BQ00975 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 AC243732.1-201ENST00000612648 864 ntBASIC19.41■□□□□ 0.7
CACNA1BQ00975 AC100791.3-201ENST00000617619 330 ntBASIC19.41■□□□□ 0.7
CACNA1BQ00975 CR769767.2-201ENST00000622735 460 ntBASIC19.41■□□□□ 0.7
CACNA1BQ00975 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 AP004607.7-201ENST00000527152 1677 ntBASIC19.41■□□□□ 0.7
CACNA1BQ00975 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1BQ00975 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1BQ00975 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1BQ00975 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms