Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.97■□□□□ 0.63
CDC42P60953 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CDC42P60953 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42P60953 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42P60953 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42P60953 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CDC42P60953 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42P60953 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC42P60953 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.96■□□□□ 0.63
CDC42P60953 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC42P60953 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42P60953 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42P60953 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC42P60953 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC42P60953 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42P60953 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC42P60953 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC42P60953 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42P60953 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC42P60953 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC42P60953 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC42P60953 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC42P60953 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC42P60953 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDC42P60953 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42P60953 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42P60953 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDC42P60953 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42P60953 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDC42P60953 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42P60953 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42P60953 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
CDC42P60953 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42P60953 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC42P60953 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42P60953 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42P60953 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42P60953 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDC42P60953 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDC42P60953 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDC42P60953 RARRES2P1-201ENST00000474487 481 ntBASIC18.94■□□□□ 0.62
CDC42P60953 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.94■□□□□ 0.62
CDC42P60953 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42P60953 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC42P60953 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42P60953 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42P60953 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDC42P60953 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42P60953 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDC42P60953 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42P60953 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDC42P60953 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDC42P60953 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC42P60953 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDC42P60953 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC42P60953 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC42P60953 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC42P60953 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 UNC93B8-201ENST00000511903 705 ntBASIC18.93■□□□□ 0.62
CDC42P60953 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDC42P60953 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC42P60953 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CDC42P60953 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42P60953 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDC42P60953 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDC42P60953 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CDC42P60953 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CDC42P60953 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC42P60953 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC42P60953 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 AP005435.1-201ENST00000529293 1178 ntBASIC18.92■□□□□ 0.62
CDC42P60953 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC42P60953 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDC42P60953 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC42P60953 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms