Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN20P56880 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN20P56880 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN20P56880 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.02■□□□□ 0.64
CLDN20P56880 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN20P56880 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLDN20P56880 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN20P56880 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN20P56880 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
CLDN20P56880 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN20P56880 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN20P56880 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.01■□□□□ 0.63
CLDN20P56880 UBE2DNL-204ENST00000602536 740 ntBASIC19.01■□□□□ 0.63
CLDN20P56880 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN20P56880 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
CLDN20P56880 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN20P56880 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CLDN20P56880 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN20P56880 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CLDN20P56880 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN20P56880 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN20P56880 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN20P56880 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN20P56880 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19■□□□□ 0.63
CLDN20P56880 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN20P56880 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN20P56880 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN20P56880 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19■□□□□ 0.63
CLDN20P56880 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19■□□□□ 0.63
CLDN20P56880 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19■□□□□ 0.63
CLDN20P56880 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19■□□□□ 0.63
CLDN20P56880 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19■□□□□ 0.63
CLDN20P56880 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19■□□□□ 0.63
CLDN20P56880 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN20P56880 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19■□□□□ 0.63
CLDN20P56880 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19■□□□□ 0.63
CLDN20P56880 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLDN20P56880 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN20P56880 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 AL157384.1-201ENST00000445995 2473 ntBASIC18.99■□□□□ 0.63
CLDN20P56880 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLDN20P56880 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.99■□□□□ 0.63
CLDN20P56880 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN20P56880 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN20P56880 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CLDN20P56880 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN20P56880 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN20P56880 AC007952.6-201ENST00000573168 2673 ntBASIC18.98■□□□□ 0.63
CLDN20P56880 AC003957.1-201ENST00000625108 2673 ntBASIC18.98■□□□□ 0.63
CLDN20P56880 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN20P56880 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN20P56880 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN20P56880 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.98■□□□□ 0.63
CLDN20P56880 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN20P56880 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN20P56880 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.98■□□□□ 0.63
CLDN20P56880 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.98■□□□□ 0.63
CLDN20P56880 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLDN20P56880 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN20P56880 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLDN20P56880 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN20P56880 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN20P56880 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN20P56880 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN20P56880 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN20P56880 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms