Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PER3P56645 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PER3P56645 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.14■□□□□ 0.65
PER3P56645 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.14■□□□□ 0.65
PER3P56645 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.14■□□□□ 0.65
PER3P56645 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PER3P56645 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PER3P56645 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.14■□□□□ 0.65
PER3P56645 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PER3P56645 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PER3P56645 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PER3P56645 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PER3P56645 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PER3P56645 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PER3P56645 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.13■□□□□ 0.65
PER3P56645 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PER3P56645 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.13■□□□□ 0.65
PER3P56645 CNN2P6-201ENST00000439038 900 ntBASIC19.13■□□□□ 0.65
PER3P56645 AL034346.1-201ENST00000568244 1277 ntBASIC19.13■□□□□ 0.65
PER3P56645 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.13■□□□□ 0.65
PER3P56645 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.13■□□□□ 0.65
PER3P56645 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.13■□□□□ 0.65
PER3P56645 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PER3P56645 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.13■□□□□ 0.65
PER3P56645 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PER3P56645 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PER3P56645 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.13■□□□□ 0.65
PER3P56645 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PER3P56645 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PER3P56645 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PER3P56645 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PER3P56645 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PER3P56645 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.12■□□□□ 0.65
PER3P56645 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.12■□□□□ 0.65
PER3P56645 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.12■□□□□ 0.65
PER3P56645 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.12■□□□□ 0.65
PER3P56645 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.12■□□□□ 0.65
PER3P56645 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PER3P56645 AC008694.1-202ENST00000636953 945 ntBASIC19.12■□□□□ 0.65
PER3P56645 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PER3P56645 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PER3P56645 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PER3P56645 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PER3P56645 MKRN4P-201ENST00000444706 1521 ntBASIC19.11■□□□□ 0.65
PER3P56645 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PER3P56645 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PER3P56645 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PER3P56645 AC010141.2-201ENST00000452426 721 ntBASIC19.11■□□□□ 0.65
PER3P56645 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PER3P56645 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.11■□□□□ 0.65
PER3P56645 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.11■□□□□ 0.65
PER3P56645 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.11■□□□□ 0.65
PER3P56645 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.11■□□□□ 0.65
PER3P56645 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.11■□□□□ 0.65
PER3P56645 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.11■□□□□ 0.65
PER3P56645 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PER3P56645 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PER3P56645 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PER3P56645 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PER3P56645 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.11■□□□□ 0.65
PER3P56645 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PER3P56645 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PER3P56645 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.1■□□□□ 0.65
PER3P56645 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.1■□□□□ 0.65
PER3P56645 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.1■□□□□ 0.65
PER3P56645 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 AC098934.4-201ENST00000564127 592 ntBASIC19.1■□□□□ 0.65
PER3P56645 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
PER3P56645 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PER3P56645 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PER3P56645 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.09■□□□□ 0.65
PER3P56645 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.09■□□□□ 0.65
PER3P56645 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PER3P56645 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PER3P56645 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
PER3P56645 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PER3P56645 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms