Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.69■□□□□ 0.58
GFRA1P56159 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 CDV3P1-201ENST00000471403 739 ntBASIC18.69■□□□□ 0.58
GFRA1P56159 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA1P56159 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA1P56159 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.69■□□□□ 0.58
GFRA1P56159 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.69■□□□□ 0.58
GFRA1P56159 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA1P56159 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
GFRA1P56159 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA1P56159 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GFRA1P56159 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA1P56159 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA1P56159 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA1P56159 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA1P56159 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.68■□□□□ 0.58
GFRA1P56159 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA1P56159 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.68■□□□□ 0.58
GFRA1P56159 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.68■□□□□ 0.58
GFRA1P56159 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.68■□□□□ 0.58
GFRA1P56159 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA1P56159 AC079834.2-201ENST00000609776 1949 ntBASIC18.68■□□□□ 0.58
GFRA1P56159 MKRN4P-201ENST00000444706 1521 ntBASIC18.68■□□□□ 0.58
GFRA1P56159 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA1P56159 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA1P56159 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GFRA1P56159 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
GFRA1P56159 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA1P56159 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GFRA1P56159 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.67■□□□□ 0.58
GFRA1P56159 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GFRA1P56159 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.67■□□□□ 0.58
GFRA1P56159 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.67■□□□□ 0.58
GFRA1P56159 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA1P56159 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GFRA1P56159 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
GFRA1P56159 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GFRA1P56159 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GFRA1P56159 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA1P56159 AL138781.1-201ENST00000566567 1274 ntBASIC18.67■□□□□ 0.58
GFRA1P56159 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.67■□□□□ 0.58
GFRA1P56159 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.67■□□□□ 0.58
GFRA1P56159 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA1P56159 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
GFRA1P56159 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GFRA1P56159 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.67■□□□□ 0.58
GFRA1P56159 AC010980.2-201ENST00000587099 1412 ntBASIC18.66■□□□□ 0.58
GFRA1P56159 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 AC007322.3-201ENST00000426526 701 ntBASIC18.66■□□□□ 0.58
GFRA1P56159 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.66■□□□□ 0.58
GFRA1P56159 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.66■□□□□ 0.58
GFRA1P56159 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFRA1P56159 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA1P56159 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA1P56159 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA1P56159 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
GFRA1P56159 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.65■□□□□ 0.58
GFRA1P56159 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GFRA1P56159 LINC00565-201ENST00000562710 2331 ntBASIC18.65■□□□□ 0.58
GFRA1P56159 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GFRA1P56159 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.65■□□□□ 0.58
GFRA1P56159 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA1P56159 MIPEPP3-201ENST00000412105 444 ntBASIC18.65■□□□□ 0.58
GFRA1P56159 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GFRA1P56159 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.65■□□□□ 0.58
GFRA1P56159 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.65■□□□□ 0.58
GFRA1P56159 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.65■□□□□ 0.58
GFRA1P56159 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA1P56159 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA1P56159 AC116050.2-201ENST00000612102 1779 ntBASIC18.65■□□□□ 0.58
GFRA1P56159 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFRA1P56159 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.65■□□□□ 0.58
GFRA1P56159 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GFRA1P56159 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
GFRA1P56159 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GFRA1P56159 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.64■□□□□ 0.57
GFRA1P56159 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GFRA1P56159 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GFRA1P56159 AC073210.2-201ENST00000430369 194 ntBASIC18.64■□□□□ 0.57
GFRA1P56159 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.64■□□□□ 0.57
GFRA1P56159 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.64■□□□□ 0.57
GFRA1P56159 AC100791.3-201ENST00000617619 330 ntBASIC18.64■□□□□ 0.57
GFRA1P56159 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.64■□□□□ 0.57
GFRA1P56159 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.64■□□□□ 0.57
GFRA1P56159 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.64■□□□□ 0.57
GFRA1P56159 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms