Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDH13P55290 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CDH13P55290 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.31■□□□□ 0.84
CDH13P55290 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH13P55290 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH13P55290 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH13P55290 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH13P55290 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CDH13P55290 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH13P55290 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH13P55290 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH13P55290 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH13P55290 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH13P55290 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH13P55290 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
CDH13P55290 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH13P55290 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH13P55290 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH13P55290 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH13P55290 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CDH13P55290 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH13P55290 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH13P55290 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDH13P55290 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDH13P55290 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH13P55290 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH13P55290 EEF1DP3-203ENST00000566025 782 ntBASIC20.29■□□□□ 0.84
CDH13P55290 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.29■□□□□ 0.84
CDH13P55290 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH13P55290 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH13P55290 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.29■□□□□ 0.84
CDH13P55290 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH13P55290 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH13P55290 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH13P55290 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH13P55290 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH13P55290 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
CDH13P55290 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDH13P55290 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDH13P55290 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 AP005212.1-201ENST00000581547 1997 ntBASIC20.28■□□□□ 0.84
CDH13P55290 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDH13P55290 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH13P55290 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDH13P55290 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.28■□□□□ 0.84
CDH13P55290 AC053503.5-201ENST00000601508 636 ntBASIC20.28■□□□□ 0.84
CDH13P55290 AL139246.5-201ENST00000606645 996 ntBASIC20.28■□□□□ 0.84
CDH13P55290 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDH13P55290 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 AC061975.6-201ENST00000579045 1553 ntBASIC20.28■□□□□ 0.84
CDH13P55290 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDH13P55290 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH13P55290 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH13P55290 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH13P55290 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH13P55290 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH13P55290 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH13P55290 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH13P55290 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.27■□□□□ 0.84
CDH13P55290 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.27■□□□□ 0.84
CDH13P55290 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH13P55290 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH13P55290 TPRG1LP1-201ENST00000598702 760 ntBASIC20.27■□□□□ 0.84
CDH13P55290 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDH13P55290 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH13P55290 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH13P55290 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDH13P55290 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDH13P55290 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH13P55290 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 AL391422.3-201ENST00000603791 2761 ntBASIC20.26■□□□□ 0.83
CDH13P55290 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.26■□□□□ 0.83
CDH13P55290 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.26■□□□□ 0.83
CDH13P55290 AL354811.1-201ENST00000610286 706 ntBASIC20.26■□□□□ 0.83
CDH13P55290 MIR6084-201ENST00000622012 110 ntBASIC20.26■□□□□ 0.83
CDH13P55290 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH13P55290 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH13P55290 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms