Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP1B3P54709 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP1B3P54709 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP1B3P54709 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ATP1B3P54709 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP1B3P54709 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP1B3P54709 AC091305.1-201ENST00000479476 895 ntBASIC17.98■□□□□ 0.47
ATP1B3P54709 AF213884.3-201ENST00000563833 479 ntBASIC17.98■□□□□ 0.47
ATP1B3P54709 AC110285.6-201ENST00000617652 491 ntBASIC17.98■□□□□ 0.47
ATP1B3P54709 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP1B3P54709 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.98■□□□□ 0.47
ATP1B3P54709 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP1B3P54709 AL391422.3-201ENST00000603791 2761 ntBASIC17.98■□□□□ 0.47
ATP1B3P54709 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ATP1B3P54709 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ATP1B3P54709 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP1B3P54709 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP1B3P54709 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ATP1B3P54709 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ATP1B3P54709 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.97■□□□□ 0.47
ATP1B3P54709 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP1B3P54709 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.97■□□□□ 0.47
ATP1B3P54709 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP1B3P54709 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP1B3P54709 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.97■□□□□ 0.47
ATP1B3P54709 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
ATP1B3P54709 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP1B3P54709 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP1B3P54709 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP1B3P54709 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP1B3P54709 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ATP1B3P54709 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP1B3P54709 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP1B3P54709 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 LINC01006-201ENST00000333319 2292 ntBASIC17.96■□□□□ 0.47
ATP1B3P54709 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP1B3P54709 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ATP1B3P54709 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATP1B3P54709 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 MIR939-201ENST00000401314 82 ntBASIC17.96■□□□□ 0.47
ATP1B3P54709 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP1B3P54709 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP1B3P54709 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP1B3P54709 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP1B3P54709 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
ATP1B3P54709 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATP1B3P54709 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP1B3P54709 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
ATP1B3P54709 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP1B3P54709 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP1B3P54709 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ATP1B3P54709 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP1B3P54709 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP1B3P54709 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP1B3P54709 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP1B3P54709 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP1B3P54709 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATP1B3P54709 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP1B3P54709 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP1B3P54709 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.94■□□□□ 0.46
ATP1B3P54709 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP1B3P54709 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.94■□□□□ 0.46
ATP1B3P54709 AL136967.2-201ENST00000623968 743 ntBASIC17.94■□□□□ 0.46
ATP1B3P54709 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP1B3P54709 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP1B3P54709 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms