Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.16■■□□□ 1.3
CPT1AP50416 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CPT1AP50416 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CPT1AP50416 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.16■■□□□ 1.3
CPT1AP50416 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CPT1AP50416 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.16■■□□□ 1.3
CPT1AP50416 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.16■■□□□ 1.3
CPT1AP50416 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.16■■□□□ 1.3
CPT1AP50416 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.16■■□□□ 1.3
CPT1AP50416 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.16■■□□□ 1.3
CPT1AP50416 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.16■■□□□ 1.3
CPT1AP50416 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPT1AP50416 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CPT1AP50416 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.16■■□□□ 1.3
CPT1AP50416 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPT1AP50416 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPT1AP50416 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.16■■□□□ 1.3
CPT1AP50416 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPT1AP50416 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CPT1AP50416 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.15■■□□□ 1.3
CPT1AP50416 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPT1AP50416 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.15■■□□□ 1.3
CPT1AP50416 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.15■■□□□ 1.3
CPT1AP50416 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.15■■□□□ 1.3
CPT1AP50416 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPT1AP50416 KRT17P3-201ENST00000420566 1262 ntBASIC23.15■■□□□ 1.3
CPT1AP50416 AL596275.1-201ENST00000423464 877 ntBASIC23.15■■□□□ 1.3
CPT1AP50416 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.15■■□□□ 1.3
CPT1AP50416 AL359736.2-201ENST00000621992 437 ntBASIC23.15■■□□□ 1.3
CPT1AP50416 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPT1AP50416 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPT1AP50416 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.15■■□□□ 1.3
CPT1AP50416 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CPT1AP50416 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.14■■□□□ 1.3
CPT1AP50416 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CPT1AP50416 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPT1AP50416 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.14■■□□□ 1.29
CPT1AP50416 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPT1AP50416 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.14■■□□□ 1.29
CPT1AP50416 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPT1AP50416 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.14■■□□□ 1.29
CPT1AP50416 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CPT1AP50416 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CPT1AP50416 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.14■■□□□ 1.29
CPT1AP50416 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CPT1AP50416 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPT1AP50416 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPT1AP50416 AC116050.2-201ENST00000612102 1779 ntBASIC23.14■■□□□ 1.29
CPT1AP50416 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPT1AP50416 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CPT1AP50416 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.14■■□□□ 1.29
CPT1AP50416 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPT1AP50416 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPT1AP50416 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CPT1AP50416 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.13■■□□□ 1.29
CPT1AP50416 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CPT1AP50416 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPT1AP50416 AC008550.1-201ENST00000511500 884 ntBASIC23.13■■□□□ 1.29
CPT1AP50416 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.13■■□□□ 1.29
CPT1AP50416 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPT1AP50416 AC105020.6-201ENST00000621523 1217 ntBASIC23.13■■□□□ 1.29
CPT1AP50416 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.13■■□□□ 1.29
CPT1AP50416 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPT1AP50416 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPT1AP50416 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.13■■□□□ 1.29
CPT1AP50416 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPT1AP50416 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.13■■□□□ 1.29
CPT1AP50416 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.13■■□□□ 1.29
CPT1AP50416 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CPT1AP50416 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.12■■□□□ 1.29
CPT1AP50416 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.12■■□□□ 1.29
CPT1AP50416 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.12■■□□□ 1.29
CPT1AP50416 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.12■■□□□ 1.29
CPT1AP50416 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.12■■□□□ 1.29
CPT1AP50416 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.12■■□□□ 1.29
CPT1AP50416 C9orf163-202ENST00000624034 2573 ntBASIC23.12■■□□□ 1.29
CPT1AP50416 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPT1AP50416 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CPT1AP50416 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.11■■□□□ 1.29
CPT1AP50416 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
CPT1AP50416 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.11■■□□□ 1.29
CPT1AP50416 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.11■■□□□ 1.29
CPT1AP50416 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPT1AP50416 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CPT1AP50416 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CPT1AP50416 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CPT1AP50416 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.11■■□□□ 1.29
CPT1AP50416 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.11■■□□□ 1.29
CPT1AP50416 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CPT1AP50416 FAM197Y4-202ENST00000622692 608 ntBASIC23.11■■□□□ 1.29
CPT1AP50416 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms