Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 IRC4YDR540C 540 nt1.48□□□□□ -2.17
RPB11P38902 IRC6YFR043C 714 nt1.48□□□□□ -2.17
RPB11P38902 ACB1YGR037C 264 nt1.48□□□□□ -2.17
RPB11P38902 RPS22BYLR367W 393 nt1.48□□□□□ -2.17
RPB11P38902 SIP18YMR175W 240 nt1.48□□□□□ -2.17
RPB11P38902 RTT101YJL047C 2529 nt1.48□□□□□ -2.17
RPB11P38902 YEL043WYEL043W 2871 nt1.47□□□□□ -2.17
RPB11P38902 SSY1YDR160W 2559 nt1.47□□□□□ -2.17
RPB11P38902 CFT2YLR115W 2580 nt1.47□□□□□ -2.17
RPB11P38902 tC(GCA)BtC(GCA)B 72 nt1.47□□□□□ -2.17
RPB11P38902 tC(GCA)GtC(GCA)G 72 nt1.47□□□□□ -2.17
RPB11P38902 tC(GCA)P1tC(GCA)P1 72 nt1.47□□□□□ -2.17
RPB11P38902 tC(GCA)P2tC(GCA)P2 72 nt1.47□□□□□ -2.17
RPB11P38902 SDC1YDR469W 528 nt1.47□□□□□ -2.17
RPB11P38902 EMI1YDR512C 564 nt1.47□□□□□ -2.17
RPB11P38902 VEL1YGL258W 621 nt1.47□□□□□ -2.17
RPB11P38902 MTM1YGR257C 1101 nt1.47□□□□□ -2.17
RPB11P38902 CSM2YIL132C 642 nt1.47□□□□□ -2.17
RPB11P38902 PRM6YML047C 1059 nt1.47□□□□□ -2.17
RPB11P38902 SRT1YMR101C 1032 nt1.47□□□□□ -2.17
RPB11P38902 RPL16BYNL069C 597 nt1.47□□□□□ -2.17
RPB11P38902 MDM10YAL010C 1482 nt1.47□□□□□ -2.17
RPB11P38902 SSQ1YLR369W 1974 nt1.47□□□□□ -2.17
RPB11P38902 APC5YOR249C 2058 nt1.46□□□□□ -2.18
RPB11P38902 RUD3YOR216C 1455 nt1.46□□□□□ -2.18
RPB11P38902 HSH155YMR288W 2916 nt1.46□□□□□ -2.18
RPB11P38902 VTC1YER072W 390 nt1.46□□□□□ -2.18
RPB11P38902 YAP5YIR018W 738 nt1.46□□□□□ -2.18
RPB11P38902 YKL070WYKL070W 510 nt1.46□□□□□ -2.18
RPB11P38902 RNP1YLL046C 750 nt1.46□□□□□ -2.18
RPB11P38902 FAB1YFR019W 6837 nt1.46□□□□□ -2.18
RPB11P38902 KAR5YMR065W 1515 nt1.45□□□□□ -2.18
RPB11P38902 INP53YOR109W 3324 nt1.45□□□□□ -2.18
RPB11P38902 HSL1YKL101W 4557 nt1.45□□□□□ -2.18
RPB11P38902 MES1YGR264C 2256 nt1.45□□□□□ -2.18
RPB11P38902 SKP2YNL311C 2292 nt1.45□□□□□ -2.18
RPB11P38902 HLR1YDR528W 1272 nt1.45□□□□□ -2.18
RPB11P38902 SKG1YKR100C 1068 nt1.45□□□□□ -2.18
RPB11P38902 VTI1YMR197C 654 nt1.45□□□□□ -2.18
RPB11P38902 YMR247W-AYMR247W-A 144 nt1.45□□□□□ -2.18
RPB11P38902 DSE3YOR264W 1293 nt1.45□□□□□ -2.18
RPB11P38902 YOR093CYOR093C 4947 nt1.45□□□□□ -2.18
RPB11P38902 BUD2YKL092C 3315 nt1.45□□□□□ -2.18
RPB11P38902 RGA2YDR379W 3030 nt1.44□□□□□ -2.18
RPB11P38902 NHP10YDL002C 612 nt1.44□□□□□ -2.18
RPB11P38902 VPS41YDR080W 2979 nt1.44□□□□□ -2.18
RPB11P38902 EMP24YGL200C 612 nt1.44□□□□□ -2.18
RPB11P38902 MMF1YIL051C 438 nt1.44□□□□□ -2.18
RPB11P38902 ASG7YJL170C 630 nt1.44□□□□□ -2.18
RPB11P38902 ATP7YKL016C 525 nt1.44□□□□□ -2.18
RPB11P38902 REX3YLR107W 1215 nt1.44□□□□□ -2.18
RPB11P38902 YLR402WYLR402W 192 nt1.44□□□□□ -2.18
RPB11P38902 YML084WYML084W 309 nt1.44□□□□□ -2.18
RPB11P38902 HUA2YOR284W 732 nt1.44□□□□□ -2.18
RPB11P38902 APA1YCL050C 966 nt1.44□□□□□ -2.18
RPB11P38902 PUF4YGL014W 2667 nt1.44□□□□□ -2.18
RPB11P38902 LHS1YKL073W 2646 nt1.44□□□□□ -2.18
RPB11P38902 VPH1YOR270C 2523 nt1.43□□□□□ -2.18
RPB11P38902 POL4YCR014C 1749 nt1.43□□□□□ -2.18
RPB11P38902 VAC8YEL013W 1737 nt1.43□□□□□ -2.18
RPB11P38902 HER1YOR227W 3741 nt1.43□□□□□ -2.18
RPB11P38902 DNF3YMR162C 4971 nt1.43□□□□□ -2.18
RPB11P38902 RRG1YDR065W 1098 nt1.43□□□□□ -2.18
RPB11P38902 BRP1YGL007W 378 nt1.43□□□□□ -2.18
RPB11P38902 YGR226CYGR226C 210 nt1.43□□□□□ -2.18
RPB11P38902 RGM1YMR182C 636 nt1.43□□□□□ -2.18
RPB11P38902 PDR17YNL264C 1053 nt1.43□□□□□ -2.18
RPB11P38902 MED8YBR193C 672 nt1.43□□□□□ -2.18
RPB11P38902 MAL33YBR297W 1407 nt1.42□□□□□ -2.18
RPB11P38902 POM152YMR129W 4014 nt1.42□□□□□ -2.18
RPB11P38902 SAE2YGL175C 1038 nt1.42□□□□□ -2.18
RPB11P38902 PKH3YDR466W 2697 nt1.42□□□□□ -2.18
RPB11P38902 RIT1YMR283C 1542 nt1.41□□□□□ -2.18
RPB11P38902 GYP5YPL249C 2685 nt1.41□□□□□ -2.18
RPB11P38902 YER068C-AYER068C-A 432 nt1.41□□□□□ -2.18
RPB11P38902 MPS2YGL075C 1164 nt1.41□□□□□ -2.18
RPB11P38902 YGR190CYGR190C 366 nt1.41□□□□□ -2.18
RPB11P38902 NYV1YLR093C 762 nt1.41□□□□□ -2.18
RPB11P38902 HRI1YLR301W 735 nt1.41□□□□□ -2.18
RPB11P38902 SRL1YOR247W 633 nt1.41□□□□□ -2.18
RPB11P38902 RPS10AYOR293W 318 nt1.41□□□□□ -2.18
RPB11P38902 SAR1YPL218W 573 nt1.41□□□□□ -2.18
RPB11P38902 RPL36BYPL249C-A 303 nt1.41□□□□□ -2.18
RPB11P38902 SLY41YOR307C 1362 nt1.41□□□□□ -2.18
RPB11P38902 CAT2YML042W 2013 nt1.4□□□□□ -2.18
RPB11P38902 VPS35YJL154C 2835 nt1.4□□□□□ -2.18
RPB11P38902 INO80YGL150C 4470 nt1.4□□□□□ -2.19
RPB11P38902 TRL1YJL087C 2484 nt1.4□□□□□ -2.19
RPB11P38902 YJL016WYJL016W 1686 nt1.4□□□□□ -2.19
RPB11P38902 PLM2YDR501W 1566 nt1.4□□□□□ -2.19
RPB11P38902 YDL163WYDL163W 303 nt1.4□□□□□ -2.19
RPB11P38902 RPA34YJL148W 702 nt1.4□□□□□ -2.19
RPB11P38902 YLR379WYLR379W 375 nt1.4□□□□□ -2.19
RPB11P38902 TAF4YMR005W 1167 nt1.4□□□□□ -2.19
RPB11P38902 CTP1YBR291C 900 nt1.4□□□□□ -2.19
RPB11P38902 IRA1YBR140C 9279 nt1.4□□□□□ -2.19
RPB11P38902 UBP16YPL072W 1500 nt1.4□□□□□ -2.19
RPB11P38902 NPR1YNL183C 2373 nt1.4□□□□□ -2.19
RPB11P38902 STD1YOR047C 1335 nt1.4□□□□□ -2.19
RPB11P38902 HCS1YKL017C 2052 nt1.39□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 49 ms