Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA6P31267 AC092053.2-201ENST00000640557 1818 ntBASIC20.74■□□□□ 0.91
HOXA6P31267 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXA6P31267 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXA6P31267 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HOXA6P31267 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.73■□□□□ 0.91
HOXA6P31267 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXA6P31267 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA6P31267 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HOXA6P31267 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HOXA6P31267 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HOXA6P31267 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HOXA6P31267 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXA6P31267 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
HOXA6P31267 C2orf69P4-201ENST00000565394 541 ntBASIC20.72■□□□□ 0.91
HOXA6P31267 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HOXA6P31267 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA6P31267 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA6P31267 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA6P31267 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXA6P31267 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HOXA6P31267 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA6P31267 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HOXA6P31267 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXA6P31267 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXA6P31267 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXA6P31267 MIR4785-201ENST00000585005 73 ntBASIC20.71■□□□□ 0.91
HOXA6P31267 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA6P31267 AC097493.4-201ENST00000641197 219 ntBASIC20.71■□□□□ 0.91
HOXA6P31267 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA6P31267 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXA6P31267 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXA6P31267 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA6P31267 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXA6P31267 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HOXA6P31267 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HOXA6P31267 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HOXA6P31267 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HOXA6P31267 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA6P31267 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HOXA6P31267 TSPY7P-201ENST00000431358 1114 ntBASIC20.7■□□□□ 0.9
HOXA6P31267 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA6P31267 KRT18P21-201ENST00000515767 1272 ntBASIC20.7■□□□□ 0.9
HOXA6P31267 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA6P31267 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.7■□□□□ 0.9
HOXA6P31267 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXA6P31267 AC120498.8-201ENST00000614275 531 ntBASIC20.7■□□□□ 0.9
HOXA6P31267 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA6P31267 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA6P31267 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HOXA6P31267 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HOXA6P31267 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA6P31267 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA6P31267 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HOXA6P31267 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
HOXA6P31267 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HOXA6P31267 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA6P31267 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXA6P31267 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA6P31267 AC012306.2-201ENST00000609350 630 ntBASIC20.69■□□□□ 0.9
HOXA6P31267 AC110285.5-201ENST00000611501 352 ntBASIC20.69■□□□□ 0.9
HOXA6P31267 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HOXA6P31267 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA6P31267 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXA6P31267 C11orf96-202ENST00000528572 1834 ntBASIC20.69■□□□□ 0.9
HOXA6P31267 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA6P31267 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HOXA6P31267 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.68■□□□□ 0.9
HOXA6P31267 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA6P31267 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms