Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
APCP25054 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.74■□□□□ 0.43
APCP25054 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.74■□□□□ 0.43
APCP25054 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
APCP25054 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.74■□□□□ 0.43
APCP25054 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.74■□□□□ 0.43
APCP25054 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APCP25054 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
APCP25054 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APCP25054 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
APCP25054 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APCP25054 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.74■□□□□ 0.43
APCP25054 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APCP25054 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
APCP25054 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.74■□□□□ 0.43
APCP25054 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
APCP25054 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APCP25054 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.73■□□□□ 0.43
APCP25054 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APCP25054 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.73■□□□□ 0.43
APCP25054 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.73■□□□□ 0.43
APCP25054 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.73■□□□□ 0.43
APCP25054 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.73■□□□□ 0.43
APCP25054 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.73■□□□□ 0.43
APCP25054 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
APCP25054 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APCP25054 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APCP25054 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.73■□□□□ 0.43
APCP25054 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.73■□□□□ 0.43
APCP25054 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
APCP25054 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.73■□□□□ 0.43
APCP25054 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.73■□□□□ 0.43
APCP25054 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.73■□□□□ 0.43
APCP25054 AC073508.3-201ENST00000619697 1419 ntBASIC17.73■□□□□ 0.43
APCP25054 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
APCP25054 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
APCP25054 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APCP25054 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APCP25054 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
APCP25054 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APCP25054 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APCP25054 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.72■□□□□ 0.43
APCP25054 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.72■□□□□ 0.43
APCP25054 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APCP25054 FAM21FP-204ENST00000608637 956 ntBASIC17.72■□□□□ 0.43
APCP25054 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.72■□□□□ 0.43
APCP25054 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
APCP25054 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APCP25054 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APCP25054 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.72■□□□□ 0.43
APCP25054 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.72■□□□□ 0.43
APCP25054 KRT18P22-201ENST00000402024 1347 ntBASIC17.71■□□□□ 0.43
APCP25054 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APCP25054 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.71■□□□□ 0.43
APCP25054 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.71■□□□□ 0.43
APCP25054 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
APCP25054 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APCP25054 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.71■□□□□ 0.43
APCP25054 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APCP25054 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.71■□□□□ 0.43
APCP25054 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APCP25054 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APCP25054 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.71■□□□□ 0.43
APCP25054 TERF1P1-201ENST00000311003 1181 ntBASIC17.71■□□□□ 0.43
APCP25054 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
APCP25054 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
APCP25054 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.71■□□□□ 0.43
APCP25054 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APCP25054 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APCP25054 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
APCP25054 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.71■□□□□ 0.43
APCP25054 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
APCP25054 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.71■□□□□ 0.42
APCP25054 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.71■□□□□ 0.42
APCP25054 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APCP25054 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.7■□□□□ 0.42
APCP25054 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.7■□□□□ 0.42
APCP25054 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APCP25054 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.7■□□□□ 0.42
APCP25054 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.7■□□□□ 0.42
APCP25054 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APCP25054 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
APCP25054 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.7■□□□□ 0.42
APCP25054 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.7■□□□□ 0.42
APCP25054 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
APCP25054 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.7■□□□□ 0.42
APCP25054 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APCP25054 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
APCP25054 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
APCP25054 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APCP25054 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APCP25054 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APCP25054 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APCP25054 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APCP25054 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APCP25054 AF186192.3-201ENST00000583427 947 ntBASIC17.69■□□□□ 0.42
APCP25054 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.69■□□□□ 0.42
APCP25054 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APCP25054 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
APCP25054 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms