Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 AC131212.1-201ENST00000613771 668 ntBASIC19.3■□□□□ 0.68
TNFRSF1BP20333 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF1BP20333 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.29■□□□□ 0.68
TNFRSF1BP20333 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF1BP20333 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 AFG3L1P-217ENST00000557444 2447 ntBASIC19.28■□□□□ 0.68
TNFRSF1BP20333 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF1BP20333 AC007225.1-201ENST00000566331 1836 ntBASIC19.28■□□□□ 0.68
TNFRSF1BP20333 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF1BP20333 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNFRSF1BP20333 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFRSF1BP20333 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TNFRSF1BP20333 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 AC096631.2-201ENST00000436136 790 ntBASIC19.26■□□□□ 0.67
TNFRSF1BP20333 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 AC112907.3-201ENST00000577781 2400 ntBASIC19.26■□□□□ 0.67
TNFRSF1BP20333 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF1BP20333 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms