Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCLP18206 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
VCLP18206 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
VCLP18206 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VCLP18206 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCLP18206 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.83■□□□□ 0.93
VCLP18206 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.83■□□□□ 0.93
VCLP18206 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.83■□□□□ 0.93
VCLP18206 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCLP18206 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.83■□□□□ 0.93
VCLP18206 EEF1DP3-203ENST00000566025 782 ntBASIC20.83■□□□□ 0.93
VCLP18206 KRT18P61-201ENST00000585825 1298 ntBASIC20.83■□□□□ 0.93
VCLP18206 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCLP18206 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.83■□□□□ 0.92
VCLP18206 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VCLP18206 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCLP18206 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
VCLP18206 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
VCLP18206 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.83■□□□□ 0.92
VCLP18206 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCLP18206 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCLP18206 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCLP18206 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCLP18206 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.82■□□□□ 0.92
VCLP18206 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.82■□□□□ 0.92
VCLP18206 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
VCLP18206 AC138907.5-202ENST00000569484 235 ntBASIC20.82■□□□□ 0.92
VCLP18206 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.82■□□□□ 0.92
VCLP18206 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCLP18206 AP001160.3-201ENST00000601484 763 ntBASIC20.82■□□□□ 0.92
VCLP18206 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.82■□□□□ 0.92
VCLP18206 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.82■□□□□ 0.92
VCLP18206 AC003102.1-202ENST00000563394 1796 ntBASIC20.82■□□□□ 0.92
VCLP18206 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VCLP18206 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCLP18206 Z98882.1-201ENST00000622160 2253 ntBASIC20.81■□□□□ 0.92
VCLP18206 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCLP18206 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCLP18206 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCLP18206 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.81■□□□□ 0.92
VCLP18206 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.81■□□□□ 0.92
VCLP18206 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCLP18206 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.81■□□□□ 0.92
VCLP18206 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.81■□□□□ 0.92
VCLP18206 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCLP18206 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.81■□□□□ 0.92
VCLP18206 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.8■□□□□ 0.92
VCLP18206 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.8■□□□□ 0.92
VCLP18206 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.8■□□□□ 0.92
VCLP18206 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.8■□□□□ 0.92
VCLP18206 AC010141.2-201ENST00000452426 721 ntBASIC20.8■□□□□ 0.92
VCLP18206 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.8■□□□□ 0.92
VCLP18206 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.8■□□□□ 0.92
VCLP18206 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.8■□□□□ 0.92
VCLP18206 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCLP18206 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
VCLP18206 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VCLP18206 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VCLP18206 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.79■□□□□ 0.92
VCLP18206 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.79■□□□□ 0.92
VCLP18206 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.79■□□□□ 0.92
VCLP18206 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.79■□□□□ 0.92
VCLP18206 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.79■□□□□ 0.92
VCLP18206 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 AC008175.2-201ENST00000612840 297 ntBASIC20.79■□□□□ 0.92
VCLP18206 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.79■□□□□ 0.92
VCLP18206 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCLP18206 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCLP18206 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms