Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.96■□□□□ 0.63
BMP4P12644 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BMP4P12644 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.96■□□□□ 0.63
BMP4P12644 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BMP4P12644 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BMP4P12644 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BMP4P12644 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.96■□□□□ 0.63
BMP4P12644 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.96■□□□□ 0.63
BMP4P12644 IGHV3-19-201ENST00000521488 291 ntBASIC18.96■□□□□ 0.63
BMP4P12644 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.96■□□□□ 0.63
BMP4P12644 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.96■□□□□ 0.63
BMP4P12644 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BMP4P12644 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.96■□□□□ 0.63
BMP4P12644 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BMP4P12644 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP4P12644 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.95■□□□□ 0.62
BMP4P12644 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
BMP4P12644 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.95■□□□□ 0.62
BMP4P12644 AP005212.1-201ENST00000581547 1997 ntBASIC18.95■□□□□ 0.62
BMP4P12644 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BMP4P12644 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BMP4P12644 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
BMP4P12644 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BMP4P12644 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BMP4P12644 OR2I1P-207ENST00000453522 948 ntBASIC18.95■□□□□ 0.62
BMP4P12644 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.95■□□□□ 0.62
BMP4P12644 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
BMP4P12644 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.95■□□□□ 0.62
BMP4P12644 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BMP4P12644 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BMP4P12644 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BMP4P12644 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BMP4P12644 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
BMP4P12644 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BMP4P12644 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BMP4P12644 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.94■□□□□ 0.62
BMP4P12644 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.94■□□□□ 0.62
BMP4P12644 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.94■□□□□ 0.62
BMP4P12644 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.94■□□□□ 0.62
BMP4P12644 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.94■□□□□ 0.62
BMP4P12644 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.94■□□□□ 0.62
BMP4P12644 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
BMP4P12644 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BMP4P12644 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BMP4P12644 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.93■□□□□ 0.62
BMP4P12644 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BMP4P12644 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
BMP4P12644 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.93■□□□□ 0.62
BMP4P12644 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.93■□□□□ 0.62
BMP4P12644 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
BMP4P12644 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
BMP4P12644 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.93■□□□□ 0.62
BMP4P12644 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.93■□□□□ 0.62
BMP4P12644 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BMP4P12644 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BMP4P12644 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BMP4P12644 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BMP4P12644 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
BMP4P12644 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.93■□□□□ 0.62
BMP4P12644 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BMP4P12644 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
BMP4P12644 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.92■□□□□ 0.62
BMP4P12644 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.92■□□□□ 0.62
BMP4P12644 AL354811.1-201ENST00000610286 706 ntBASIC18.92■□□□□ 0.62
BMP4P12644 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.92■□□□□ 0.62
BMP4P12644 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BMP4P12644 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
BMP4P12644 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BMP4P12644 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.91■□□□□ 0.62
BMP4P12644 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
BMP4P12644 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BMP4P12644 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BMP4P12644 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BMP4P12644 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms