Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
COL11A1P12107 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A1P12107 AL158047.1-201ENST00000445918 881 ntBASIC23.85■■□□□ 1.41
COL11A1P12107 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
COL11A1P12107 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A1P12107 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.85■■□□□ 1.41
COL11A1P12107 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.85■■□□□ 1.41
COL11A1P12107 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A1P12107 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A1P12107 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A1P12107 AC233723.2-201ENST00000623798 2106 ntBASIC23.85■■□□□ 1.41
COL11A1P12107 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A1P12107 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.85■■□□□ 1.41
COL11A1P12107 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.84■■□□□ 1.41
COL11A1P12107 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A1P12107 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A1P12107 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A1P12107 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A1P12107 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
COL11A1P12107 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A1P12107 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A1P12107 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.84■■□□□ 1.41
COL11A1P12107 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
COL11A1P12107 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A1P12107 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A1P12107 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.84■■□□□ 1.41
COL11A1P12107 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
COL11A1P12107 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
COL11A1P12107 AC116050.2-201ENST00000612102 1779 ntBASIC23.83■■□□□ 1.41
COL11A1P12107 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A1P12107 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.83■■□□□ 1.41
COL11A1P12107 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A1P12107 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.83■■□□□ 1.41
COL11A1P12107 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A1P12107 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A1P12107 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A1P12107 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
COL11A1P12107 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL11A1P12107 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A1P12107 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A1P12107 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A1P12107 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A1P12107 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A1P12107 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A1P12107 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A1P12107 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.82■■□□□ 1.4
COL11A1P12107 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A1P12107 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
COL11A1P12107 AC069544.1-201ENST00000609399 999 ntBASIC23.82■■□□□ 1.4
COL11A1P12107 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.81■■□□□ 1.4
COL11A1P12107 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
COL11A1P12107 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A1P12107 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A1P12107 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.81■■□□□ 1.4
COL11A1P12107 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A1P12107 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A1P12107 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.81■■□□□ 1.4
COL11A1P12107 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
COL11A1P12107 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A1P12107 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A1P12107 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.81■■□□□ 1.4
COL11A1P12107 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
COL11A1P12107 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A1P12107 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 AC128676.1-201ENST00000454392 318 ntBASIC23.8■■□□□ 1.4
COL11A1P12107 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.8■■□□□ 1.4
COL11A1P12107 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.8■■□□□ 1.4
COL11A1P12107 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.8■■□□□ 1.4
COL11A1P12107 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
COL11A1P12107 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 AC092368.3-202ENST00000574180 1591 ntBASIC23.8■■□□□ 1.4
COL11A1P12107 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.8■■□□□ 1.4
COL11A1P12107 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A1P12107 UNC93B4-201ENST00000505679 747 ntBASIC23.8■■□□□ 1.4
COL11A1P12107 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.8■■□□□ 1.4
COL11A1P12107 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
COL11A1P12107 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A1P12107 CYP21A1P-202ENST00000354927 1481 ntBASIC23.79■■□□□ 1.4
COL11A1P12107 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A1P12107 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A1P12107 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A1P12107 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.79■■□□□ 1.4
COL11A1P12107 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.79■■□□□ 1.4
COL11A1P12107 AL356652.1-201ENST00000615962 565 ntBASIC23.79■■□□□ 1.4
COL11A1P12107 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
COL11A1P12107 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
COL11A1P12107 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A1P12107 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.78■■□□□ 1.4
COL11A1P12107 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A1P12107 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
COL11A1P12107 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
COL11A1P12107 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A1P12107 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A1P12107 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms