Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN1P07384 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPN1P07384 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN1P07384 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN1P07384 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.41■□□□□ 0.86
CAPN1P07384 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CAPN1P07384 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.41■□□□□ 0.86
CAPN1P07384 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.41■□□□□ 0.86
CAPN1P07384 AC009237.3-201ENST00000393279 1427 ntBASIC20.41■□□□□ 0.86
CAPN1P07384 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.41■□□□□ 0.86
CAPN1P07384 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.41■□□□□ 0.86
CAPN1P07384 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN1P07384 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN1P07384 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN1P07384 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CAPN1P07384 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN1P07384 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.4■□□□□ 0.86
CAPN1P07384 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.4■□□□□ 0.86
CAPN1P07384 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CAPN1P07384 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
CAPN1P07384 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CAPN1P07384 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.4■□□□□ 0.86
CAPN1P07384 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.4■□□□□ 0.86
CAPN1P07384 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CAPN1P07384 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CAPN1P07384 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN1P07384 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPN1P07384 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.39■□□□□ 0.86
CAPN1P07384 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CAPN1P07384 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPN1P07384 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.39■□□□□ 0.85
CAPN1P07384 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPN1P07384 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.39■□□□□ 0.85
CAPN1P07384 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.39■□□□□ 0.85
CAPN1P07384 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPN1P07384 AC137761.2-201ENST00000561729 223 ntBASIC20.39■□□□□ 0.85
CAPN1P07384 AC145350.3-201ENST00000569033 163 ntBASIC20.39■□□□□ 0.85
CAPN1P07384 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPN1P07384 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CAPN1P07384 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPN1P07384 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN1P07384 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 AC055733.4-201ENST00000638462 1354 ntBASIC20.38■□□□□ 0.85
CAPN1P07384 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.38■□□□□ 0.85
CAPN1P07384 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.38■□□□□ 0.85
CAPN1P07384 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.38■□□□□ 0.85
CAPN1P07384 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.38■□□□□ 0.85
CAPN1P07384 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.38■□□□□ 0.85
CAPN1P07384 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CAPN1P07384 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.38■□□□□ 0.85
CAPN1P07384 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN1P07384 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
CAPN1P07384 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CAPN1P07384 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CAPN1P07384 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.37■□□□□ 0.85
CAPN1P07384 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.37■□□□□ 0.85
CAPN1P07384 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.37■□□□□ 0.85
CAPN1P07384 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 AC080038.1-201ENST00000611274 1154 ntBASIC20.37■□□□□ 0.85
CAPN1P07384 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN1P07384 AC005224.4-201ENST00000583262 1652 ntBASIC20.37■□□□□ 0.85
CAPN1P07384 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPN1P07384 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CAPN1P07384 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms