Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.11■■□□□ 1.61
CHGBP05060 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHGBP05060 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CHGBP05060 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHGBP05060 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.1■■□□□ 1.61
CHGBP05060 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHGBP05060 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHGBP05060 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.1■■□□□ 1.61
CHGBP05060 AC007322.1-201ENST00000426983 750 ntBASIC25.1■■□□□ 1.61
CHGBP05060 AC005181.1-201ENST00000604782 1256 ntBASIC25.1■■□□□ 1.61
CHGBP05060 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.1■■□□□ 1.61
CHGBP05060 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
CHGBP05060 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CHGBP05060 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHGBP05060 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
CHGBP05060 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHGBP05060 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHGBP05060 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.09■■□□□ 1.61
CHGBP05060 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHGBP05060 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHGBP05060 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CHGBP05060 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.09■■□□□ 1.61
CHGBP05060 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.09■■□□□ 1.61
CHGBP05060 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHGBP05060 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.08■■□□□ 1.61
CHGBP05060 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.08■■□□□ 1.61
CHGBP05060 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.08■■□□□ 1.61
CHGBP05060 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.08■■□□□ 1.61
CHGBP05060 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHGBP05060 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
CHGBP05060 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHGBP05060 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.08■■□□□ 1.61
CHGBP05060 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CHGBP05060 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHGBP05060 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.08■■□□□ 1.61
CHGBP05060 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHGBP05060 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CHGBP05060 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CHGBP05060 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.08■■□□□ 1.6
CHGBP05060 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHGBP05060 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHGBP05060 CYP2T1P-201ENST00000432607 1285 ntBASIC25.07■■□□□ 1.6
CHGBP05060 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.07■■□□□ 1.6
CHGBP05060 AC243732.1-201ENST00000612648 864 ntBASIC25.07■■□□□ 1.6
CHGBP05060 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHGBP05060 AC231657.2-201ENST00000624556 255 ntBASIC25.07■■□□□ 1.6
CHGBP05060 AC013268.1-206ENST00000638368 961 ntBASIC25.07■■□□□ 1.6
CHGBP05060 AC112229.1-201ENST00000639295 961 ntBASIC25.07■■□□□ 1.6
CHGBP05060 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHGBP05060 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHGBP05060 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHGBP05060 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CHGBP05060 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CHGBP05060 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHGBP05060 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CHGBP05060 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHGBP05060 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CHGBP05060 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
CHGBP05060 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.06■■□□□ 1.6
CHGBP05060 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHGBP05060 AC093787.1-201ENST00000450396 207 ntBASIC25.06■■□□□ 1.6
CHGBP05060 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHGBP05060 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CHGBP05060 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.06■■□□□ 1.6
CHGBP05060 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHGBP05060 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.06■■□□□ 1.6
CHGBP05060 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHGBP05060 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHGBP05060 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHGBP05060 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.05■■□□□ 1.6
CHGBP05060 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.05■■□□□ 1.6
CHGBP05060 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.05■■□□□ 1.6
CHGBP05060 HLA-L-209ENST00000420110 1011 ntBASIC25.05■■□□□ 1.6
CHGBP05060 GUSBP6-202ENST00000438529 1198 ntBASIC25.05■■□□□ 1.6
CHGBP05060 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.05■■□□□ 1.6
CHGBP05060 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHGBP05060 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.05■■□□□ 1.6
CHGBP05060 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.05■■□□□ 1.6
CHGBP05060 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHGBP05060 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHGBP05060 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHGBP05060 AL049796.1-201ENST00000565336 1766 ntBASIC25.05■■□□□ 1.6
CHGBP05060 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHGBP05060 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.04■■□□□ 1.6
CHGBP05060 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.04■■□□□ 1.6
CHGBP05060 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHGBP05060 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
CHGBP05060 AC007322.4-201ENST00000509611 723 ntBASIC25.04■■□□□ 1.6
CHGBP05060 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.04■■□□□ 1.6
CHGBP05060 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CHGBP05060 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHGBP05060 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CHGBP05060 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.04■■□□□ 1.6
CHGBP05060 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CHGBP05060 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms