Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNA1P01562 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
IFNA1P01562 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.47■□□□□ 0.23
IFNA1P01562 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNA1P01562 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFNA1P01562 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IFNA1P01562 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IFNA1P01562 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.46■□□□□ 0.23
IFNA1P01562 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNA1P01562 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.46■□□□□ 0.23
IFNA1P01562 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFNA1P01562 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNA1P01562 DUX4L9-201ENST00000449051 1259 ntBASIC16.46■□□□□ 0.23
IFNA1P01562 MIR4281-201ENST00000580852 62 ntBASIC16.46■□□□□ 0.23
IFNA1P01562 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFNA1P01562 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNA1P01562 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.46■□□□□ 0.23
IFNA1P01562 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFNA1P01562 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNA1P01562 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFNA1P01562 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 AC020763.4-201ENST00000623414 4170 ntBASIC16.45■□□□□ 0.22
IFNA1P01562 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.45■□□□□ 0.22
IFNA1P01562 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
IFNA1P01562 AC020907.5-201ENST00000624372 1936 ntBASIC16.45■□□□□ 0.22
IFNA1P01562 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IFNA1P01562 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.45■□□□□ 0.22
IFNA1P01562 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.45■□□□□ 0.22
IFNA1P01562 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.45■□□□□ 0.22
IFNA1P01562 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.45■□□□□ 0.22
IFNA1P01562 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.45■□□□□ 0.22
IFNA1P01562 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.45■□□□□ 0.22
IFNA1P01562 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
IFNA1P01562 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
IFNA1P01562 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFNA1P01562 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.45■□□□□ 0.22
IFNA1P01562 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IFNA1P01562 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.44■□□□□ 0.22
IFNA1P01562 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.44■□□□□ 0.22
IFNA1P01562 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.44■□□□□ 0.22
IFNA1P01562 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
IFNA1P01562 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
IFNA1P01562 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFNA1P01562 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.44■□□□□ 0.22
IFNA1P01562 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
IFNA1P01562 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.44■□□□□ 0.22
IFNA1P01562 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.43■□□□□ 0.22
IFNA1P01562 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.43■□□□□ 0.22
IFNA1P01562 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.43■□□□□ 0.22
IFNA1P01562 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.43■□□□□ 0.22
IFNA1P01562 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.43■□□□□ 0.22
IFNA1P01562 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.43■□□□□ 0.22
IFNA1P01562 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.43■□□□□ 0.22
IFNA1P01562 THA1P-201ENST00000590384 1145 ntBASIC16.43■□□□□ 0.22
IFNA1P01562 AC019171.1-201ENST00000601251 1056 ntBASIC16.43■□□□□ 0.22
IFNA1P01562 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.43■□□□□ 0.22
IFNA1P01562 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
IFNA1P01562 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.43■□□□□ 0.22
IFNA1P01562 AC027702.1-201ENST00000563810 1770 ntBASIC16.43■□□□□ 0.22
IFNA1P01562 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
IFNA1P01562 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
IFNA1P01562 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFNA1P01562 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms