Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP40O75818 AL512625.2-201ENST00000417533 625 ntBASIC21.37■■□□□ 1.01
RPP40O75818 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RPP40O75818 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.37■■□□□ 1.01
RPP40O75818 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPP40O75818 AC016405.3-201ENST00000607710 860 ntBASIC21.37■■□□□ 1.01
RPP40O75818 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPP40O75818 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP40O75818 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPP40O75818 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.37■■□□□ 1.01
RPP40O75818 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP40O75818 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP40O75818 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP40O75818 AP006587.3-201ENST00000525742 1516 ntBASIC21.36■■□□□ 1.01
RPP40O75818 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPP40O75818 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.36■■□□□ 1.01
RPP40O75818 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.36■■□□□ 1.01
RPP40O75818 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.36■■□□□ 1.01
RPP40O75818 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.36■■□□□ 1.01
RPP40O75818 ESRRAP1-201ENST00000400596 1257 ntBASIC21.36■■□□□ 1.01
RPP40O75818 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.36■■□□□ 1.01
RPP40O75818 BX276092.2-201ENST00000417668 665 ntBASIC21.36■■□□□ 1.01
RPP40O75818 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RPP40O75818 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.36■■□□□ 1.01
RPP40O75818 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.36■■□□□ 1.01
RPP40O75818 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.36■■□□□ 1.01
RPP40O75818 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.36■■□□□ 1.01
RPP40O75818 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPP40O75818 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPP40O75818 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.35■■□□□ 1.01
RPP40O75818 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.35■■□□□ 1.01
RPP40O75818 CLDN5-201ENST00000403084 2357 ntBASIC21.35■■□□□ 1.01
RPP40O75818 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 GCSHP5-201ENST00000443090 522 ntBASIC21.35■■□□□ 1.01
RPP40O75818 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.35■■□□□ 1.01
RPP40O75818 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.35■■□□□ 1.01
RPP40O75818 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.35■■□□□ 1.01
RPP40O75818 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.35■■□□□ 1.01
RPP40O75818 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.35■■□□□ 1.01
RPP40O75818 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RPP40O75818 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.35■■□□□ 1.01
RPP40O75818 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.35■■□□□ 1.01
RPP40O75818 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP40O75818 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPP40O75818 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RPP40O75818 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RPP40O75818 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.34■■□□□ 1.01
RPP40O75818 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RPP40O75818 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.34■■□□□ 1.01
RPP40O75818 AC097658.1-201ENST00000475555 843 ntBASIC21.34■■□□□ 1.01
RPP40O75818 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPP40O75818 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.34■■□□□ 1.01
RPP40O75818 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RPP40O75818 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.34■■□□□ 1.01
RPP40O75818 AC083880.1-201ENST00000608266 535 ntBASIC21.34■■□□□ 1.01
RPP40O75818 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.34■■□□□ 1.01
RPP40O75818 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.34■■□□□ 1.01
RPP40O75818 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPP40O75818 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RPP40O75818 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RPP40O75818 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPP40O75818 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPP40O75818 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RPP40O75818 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RPP40O75818 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.33■■□□□ 1.01
RPP40O75818 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.33■■□□□ 1.01
RPP40O75818 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.33■■□□□ 1.01
RPP40O75818 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP40O75818 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.33■■□□□ 1.01
RPP40O75818 EEF1DP3-203ENST00000566025 782 ntBASIC21.33■■□□□ 1.01
RPP40O75818 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.33■■□□□ 1.01
RPP40O75818 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RPP40O75818 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RPP40O75818 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RPP40O75818 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.32■■□□□ 1
RPP40O75818 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPP40O75818 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RPP40O75818 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RPP40O75818 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.32■■□□□ 1
RPP40O75818 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.32■■□□□ 1
RPP40O75818 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.32■■□□□ 1
RPP40O75818 AC053503.5-201ENST00000601508 636 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms