Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.98■□□□□ 0.79
SNRNP200O75643 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.98■□□□□ 0.79
SNRNP200O75643 TERF1P5-201ENST00000477545 1207 ntBASIC19.98■□□□□ 0.79
SNRNP200O75643 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SNRNP200O75643 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNRNP200O75643 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.98■□□□□ 0.79
SNRNP200O75643 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNRNP200O75643 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.98■□□□□ 0.79
SNRNP200O75643 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNRNP200O75643 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SNRNP200O75643 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.97■□□□□ 0.79
SNRNP200O75643 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.97■□□□□ 0.79
SNRNP200O75643 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.97■□□□□ 0.79
SNRNP200O75643 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.97■□□□□ 0.79
SNRNP200O75643 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SNRNP200O75643 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.97■□□□□ 0.79
SNRNP200O75643 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRNP200O75643 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP200O75643 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP200O75643 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP200O75643 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP200O75643 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP200O75643 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP200O75643 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
SNRNP200O75643 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP200O75643 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.96■□□□□ 0.79
SNRNP200O75643 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.96■□□□□ 0.79
SNRNP200O75643 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRNP200O75643 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SNRNP200O75643 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP200O75643 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP200O75643 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SNRNP200O75643 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.95■□□□□ 0.78
SNRNP200O75643 MKRN4P-201ENST00000444706 1521 ntBASIC19.95■□□□□ 0.78
SNRNP200O75643 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.95■□□□□ 0.78
SNRNP200O75643 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SNRNP200O75643 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP200O75643 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.95■□□□□ 0.78
SNRNP200O75643 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNRNP200O75643 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SNRNP200O75643 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP200O75643 HLA-L-209ENST00000420110 1011 ntBASIC19.94■□□□□ 0.78
SNRNP200O75643 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.94■□□□□ 0.78
SNRNP200O75643 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.94■□□□□ 0.78
SNRNP200O75643 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.94■□□□□ 0.78
SNRNP200O75643 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP200O75643 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SNRNP200O75643 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP200O75643 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.94■□□□□ 0.78
SNRNP200O75643 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP200O75643 AL355472.2-201ENST00000422958 438 ntBASIC19.94■□□□□ 0.78
SNRNP200O75643 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.94■□□□□ 0.78
SNRNP200O75643 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.94■□□□□ 0.78
SNRNP200O75643 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.94■□□□□ 0.78
SNRNP200O75643 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.94■□□□□ 0.78
SNRNP200O75643 AC005181.1-201ENST00000604782 1256 ntBASIC19.94■□□□□ 0.78
SNRNP200O75643 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP200O75643 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP200O75643 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
SNRNP200O75643 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.94■□□□□ 0.78
SNRNP200O75643 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRNP200O75643 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SNRNP200O75643 GPX1P1-201ENST00000388829 606 ntBASIC19.93■□□□□ 0.78
SNRNP200O75643 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP200O75643 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP200O75643 AC133552.2-202ENST00000575694 574 ntBASIC19.93■□□□□ 0.78
SNRNP200O75643 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNRNP200O75643 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.93■□□□□ 0.78
SNRNP200O75643 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SNRNP200O75643 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SNRNP200O75643 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP200O75643 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SNRNP200O75643 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP200O75643 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNRNP200O75643 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.93■□□□□ 0.78
SNRNP200O75643 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.92■□□□□ 0.78
SNRNP200O75643 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.92■□□□□ 0.78
SNRNP200O75643 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNRNP200O75643 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP200O75643 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.92■□□□□ 0.78
SNRNP200O75643 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP200O75643 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP200O75643 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.92■□□□□ 0.78
SNRNP200O75643 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.92■□□□□ 0.78
SNRNP200O75643 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.92■□□□□ 0.78
SNRNP200O75643 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRNP200O75643 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.92■□□□□ 0.78
SNRNP200O75643 SLC29A4P1-201ENST00000398760 971 ntBASIC19.91■□□□□ 0.78
SNRNP200O75643 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms