Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.1■□□□□ 0.97
PMPCBO75439 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 KRT18P5-201ENST00000436075 1291 ntBASIC21.1■□□□□ 0.97
PMPCBO75439 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.1■□□□□ 0.97
PMPCBO75439 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PMPCBO75439 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.1■□□□□ 0.97
PMPCBO75439 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.1■□□□□ 0.97
PMPCBO75439 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PMPCBO75439 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.1■□□□□ 0.97
PMPCBO75439 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMPCBO75439 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
PMPCBO75439 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.09■□□□□ 0.97
PMPCBO75439 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.09■□□□□ 0.97
PMPCBO75439 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PMPCBO75439 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.09■□□□□ 0.97
PMPCBO75439 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PMPCBO75439 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMPCBO75439 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PMPCBO75439 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PMPCBO75439 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMPCBO75439 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMPCBO75439 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMPCBO75439 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMPCBO75439 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
PMPCBO75439 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMPCBO75439 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMPCBO75439 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.08■□□□□ 0.97
PMPCBO75439 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMPCBO75439 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.08■□□□□ 0.97
PMPCBO75439 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMPCBO75439 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.08■□□□□ 0.97
PMPCBO75439 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PMPCBO75439 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PMPCBO75439 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PMPCBO75439 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PMPCBO75439 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.07■□□□□ 0.96
PMPCBO75439 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PMPCBO75439 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.07■□□□□ 0.96
PMPCBO75439 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 KRT18P20-201ENST00000548986 1279 ntBASIC21.07■□□□□ 0.96
PMPCBO75439 MIR5787-201ENST00000611784 55 ntBASIC21.07■□□□□ 0.96
PMPCBO75439 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMPCBO75439 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PMPCBO75439 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMPCBO75439 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.06■□□□□ 0.96
PMPCBO75439 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PMPCBO75439 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.06■□□□□ 0.96
PMPCBO75439 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMPCBO75439 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.06■□□□□ 0.96
PMPCBO75439 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMPCBO75439 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMPCBO75439 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.06■□□□□ 0.96
PMPCBO75439 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.06■□□□□ 0.96
PMPCBO75439 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMPCBO75439 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMPCBO75439 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PMPCBO75439 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PMPCBO75439 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMPCBO75439 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMPCBO75439 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PMPCBO75439 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.05■□□□□ 0.96
PMPCBO75439 AL162430.1-201ENST00000480705 870 ntBASIC21.05■□□□□ 0.96
PMPCBO75439 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.05■□□□□ 0.96
PMPCBO75439 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.05■□□□□ 0.96
PMPCBO75439 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.05■□□□□ 0.96
PMPCBO75439 UBE2DNL-204ENST00000602536 740 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms