Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A3O75365 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A3O75365 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A3O75365 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PTP4A3O75365 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A3O75365 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A3O75365 AP004607.4-201ENST00000530158 1459 ntBASIC18.74■□□□□ 0.59
PTP4A3O75365 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A3O75365 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A3O75365 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PTP4A3O75365 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTP4A3O75365 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTP4A3O75365 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A3O75365 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A3O75365 AC027702.1-201ENST00000563810 1770 ntBASIC18.73■□□□□ 0.59
PTP4A3O75365 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A3O75365 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A3O75365 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A3O75365 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PTP4A3O75365 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.73■□□□□ 0.59
PTP4A3O75365 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A3O75365 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A3O75365 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.73■□□□□ 0.59
PTP4A3O75365 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A3O75365 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A3O75365 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A3O75365 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A3O75365 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTP4A3O75365 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.73■□□□□ 0.59
PTP4A3O75365 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.73■□□□□ 0.59
PTP4A3O75365 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTP4A3O75365 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A3O75365 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A3O75365 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A3O75365 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A3O75365 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A3O75365 AC011484.1-201ENST00000377652 1995 ntBASIC18.72■□□□□ 0.59
PTP4A3O75365 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PTP4A3O75365 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A3O75365 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.72■□□□□ 0.59
PTP4A3O75365 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A3O75365 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.72■□□□□ 0.59
PTP4A3O75365 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.72■□□□□ 0.59
PTP4A3O75365 AL139246.5-201ENST00000606645 996 ntBASIC18.72■□□□□ 0.59
PTP4A3O75365 AL358852.1-201ENST00000623174 1268 ntBASIC18.72■□□□□ 0.59
PTP4A3O75365 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.72■□□□□ 0.59
PTP4A3O75365 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTP4A3O75365 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.71■□□□□ 0.59
PTP4A3O75365 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.71■□□□□ 0.59
PTP4A3O75365 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTP4A3O75365 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PTP4A3O75365 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.71■□□□□ 0.59
PTP4A3O75365 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.71■□□□□ 0.59
PTP4A3O75365 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.71■□□□□ 0.59
PTP4A3O75365 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.71■□□□□ 0.59
PTP4A3O75365 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PTP4A3O75365 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PTP4A3O75365 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTP4A3O75365 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTP4A3O75365 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.71■□□□□ 0.59
PTP4A3O75365 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A3O75365 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.71■□□□□ 0.59
PTP4A3O75365 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PTP4A3O75365 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.7■□□□□ 0.58
PTP4A3O75365 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTP4A3O75365 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTP4A3O75365 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.7■□□□□ 0.58
PTP4A3O75365 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.7■□□□□ 0.58
PTP4A3O75365 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.7■□□□□ 0.58
PTP4A3O75365 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTP4A3O75365 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
PTP4A3O75365 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A3O75365 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTP4A3O75365 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms