Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC012676.1-201ENST00000574705 1949 ntBASIC24.4■■□□□ 1.5
CTNND1O60716 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.4■■□□□ 1.5
CTNND1O60716 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
CTNND1O60716 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CTNND1O60716 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CTNND1O60716 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CTNND1O60716 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.4■■□□□ 1.5
CTNND1O60716 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CTNND1O60716 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CTNND1O60716 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CTNND1O60716 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.39■■□□□ 1.5
CTNND1O60716 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CTNND1O60716 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.39■■□□□ 1.49
CTNND1O60716 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.39■■□□□ 1.49
CTNND1O60716 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.39■■□□□ 1.49
CTNND1O60716 UNC93B4-201ENST00000505679 747 ntBASIC24.39■■□□□ 1.49
CTNND1O60716 PNMA6B-201ENST00000538162 1200 ntBASIC24.39■■□□□ 1.49
CTNND1O60716 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CTNND1O60716 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CTNND1O60716 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CTNND1O60716 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CTNND1O60716 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.38■■□□□ 1.49
CTNND1O60716 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.38■■□□□ 1.49
CTNND1O60716 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CTNND1O60716 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.38■■□□□ 1.49
CTNND1O60716 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.38■■□□□ 1.49
CTNND1O60716 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.38■■□□□ 1.49
CTNND1O60716 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.38■■□□□ 1.49
CTNND1O60716 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.38■■□□□ 1.49
CTNND1O60716 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.38■■□□□ 1.49
CTNND1O60716 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.38■■□□□ 1.49
CTNND1O60716 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CTNND1O60716 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.38■■□□□ 1.49
CTNND1O60716 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.38■■□□□ 1.49
CTNND1O60716 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.38■■□□□ 1.49
CTNND1O60716 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.38■■□□□ 1.49
CTNND1O60716 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CTNND1O60716 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CTNND1O60716 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTNND1O60716 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTNND1O60716 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CTNND1O60716 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
CTNND1O60716 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTNND1O60716 AL596275.1-201ENST00000423464 877 ntBASIC24.37■■□□□ 1.49
CTNND1O60716 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.37■■□□□ 1.49
CTNND1O60716 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CTNND1O60716 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.37■■□□□ 1.49
CTNND1O60716 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.37■■□□□ 1.49
CTNND1O60716 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.37■■□□□ 1.49
CTNND1O60716 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTNND1O60716 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.37■■□□□ 1.49
CTNND1O60716 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CTNND1O60716 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CTNND1O60716 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CTNND1O60716 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.36■■□□□ 1.49
CTNND1O60716 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CTNND1O60716 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.36■■□□□ 1.49
CTNND1O60716 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CTNND1O60716 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CTNND1O60716 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CTNND1O60716 UBE2SP1-201ENST00000450587 669 ntBASIC24.36■■□□□ 1.49
CTNND1O60716 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.36■■□□□ 1.49
CTNND1O60716 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CTNND1O60716 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.36■■□□□ 1.49
CTNND1O60716 AL359736.2-201ENST00000621992 437 ntBASIC24.36■■□□□ 1.49
CTNND1O60716 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CTNND1O60716 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.35■■□□□ 1.49
CTNND1O60716 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.35■■□□□ 1.49
CTNND1O60716 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.35■■□□□ 1.49
CTNND1O60716 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTNND1O60716 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
CTNND1O60716 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CTNND1O60716 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.35■■□□□ 1.49
CTNND1O60716 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CTNND1O60716 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CTNND1O60716 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CTNND1O60716 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTNND1O60716 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTNND1O60716 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTNND1O60716 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTNND1O60716 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.34■■□□□ 1.49
CTNND1O60716 AC092368.3-202ENST00000574180 1591 ntBASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms