Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
PCDH17O14917 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDH17O14917 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH17O14917 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDH17O14917 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PCDH17O14917 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH17O14917 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH17O14917 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH17O14917 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH17O14917 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH17O14917 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH17O14917 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH17O14917 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDH17O14917 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH17O14917 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH17O14917 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDH17O14917 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
PCDH17O14917 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH17O14917 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
PCDH17O14917 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH17O14917 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH17O14917 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH17O14917 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PCDH17O14917 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH17O14917 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH17O14917 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH17O14917 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH17O14917 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDH17O14917 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH17O14917 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PCDH17O14917 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH17O14917 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH17O14917 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH17O14917 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH17O14917 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH17O14917 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH17O14917 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH17O14917 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH17O14917 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH17O14917 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH17O14917 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PCDH17O14917 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDH17O14917 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH17O14917 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH17O14917 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
PCDH17O14917 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH17O14917 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH17O14917 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH17O14917 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDH17O14917 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH17O14917 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH17O14917 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH17O14917 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 AC006970.2-201ENST00000450065 779 ntBASIC19.78■□□□□ 0.76
PCDH17O14917 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH17O14917 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH17O14917 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDH17O14917 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH17O14917 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH17O14917 KRT16P2-201ENST00000414673 1423 ntBASIC19.77■□□□□ 0.76
PCDH17O14917 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDH17O14917 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDH17O14917 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH17O14917 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH17O14917 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH17O14917 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH17O14917 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDH17O14917 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH17O14917 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDH17O14917 AC007322.1-201ENST00000426983 750 ntBASIC19.77■□□□□ 0.76
PCDH17O14917 DUX4L16-201ENST00000555130 1264 ntBASIC19.77■□□□□ 0.76
PCDH17O14917 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDH17O14917 AC010536.3-201ENST00000620306 533 ntBASIC19.77■□□□□ 0.76
PCDH17O14917 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDH17O14917 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH17O14917 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDH17O14917 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms