Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COPEO14579 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.75■□□□□ 0.91
COPEO14579 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.75■□□□□ 0.91
COPEO14579 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
COPEO14579 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.75■□□□□ 0.91
COPEO14579 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.75■□□□□ 0.91
COPEO14579 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
COPEO14579 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.75■□□□□ 0.91
COPEO14579 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.75■□□□□ 0.91
COPEO14579 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.75■□□□□ 0.91
COPEO14579 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPEO14579 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COPEO14579 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.74■□□□□ 0.91
COPEO14579 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPEO14579 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPEO14579 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPEO14579 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPEO14579 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
COPEO14579 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.74■□□□□ 0.91
COPEO14579 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COPEO14579 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
COPEO14579 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.74■□□□□ 0.91
COPEO14579 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.74■□□□□ 0.91
COPEO14579 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPEO14579 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPEO14579 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPEO14579 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.73■□□□□ 0.91
COPEO14579 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COPEO14579 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.73■□□□□ 0.91
COPEO14579 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
COPEO14579 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COPEO14579 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.73■□□□□ 0.91
COPEO14579 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.73■□□□□ 0.91
COPEO14579 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPEO14579 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COPEO14579 AFG3L1P-217ENST00000557444 2447 ntBASIC20.73■□□□□ 0.91
COPEO14579 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPEO14579 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPEO14579 AC007952.6-201ENST00000573168 2673 ntBASIC20.72■□□□□ 0.91
COPEO14579 AC003957.1-201ENST00000625108 2673 ntBASIC20.72■□□□□ 0.91
COPEO14579 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.72■□□□□ 0.91
COPEO14579 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.72■□□□□ 0.91
COPEO14579 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPEO14579 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPEO14579 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPEO14579 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.72■□□□□ 0.91
COPEO14579 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.72■□□□□ 0.91
COPEO14579 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.72■□□□□ 0.91
COPEO14579 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.72■□□□□ 0.91
COPEO14579 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COPEO14579 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPEO14579 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.72■□□□□ 0.91
COPEO14579 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPEO14579 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPEO14579 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.72■□□□□ 0.91
COPEO14579 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPEO14579 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COPEO14579 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPEO14579 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPEO14579 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.71■□□□□ 0.91
COPEO14579 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COPEO14579 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPEO14579 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPEO14579 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
COPEO14579 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.71■□□□□ 0.91
COPEO14579 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.71■□□□□ 0.91
COPEO14579 MIR4466-201ENST00000606121 54 ntBASIC20.71■□□□□ 0.91
COPEO14579 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COPEO14579 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COPEO14579 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPEO14579 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPEO14579 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPEO14579 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
COPEO14579 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.7■□□□□ 0.91
COPEO14579 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COPEO14579 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
COPEO14579 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.7■□□□□ 0.91
COPEO14579 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COPEO14579 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.7■□□□□ 0.9
COPEO14579 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.7■□□□□ 0.9
COPEO14579 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms