Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SLC7A5P1-201ENST00000568957 537 ntBASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC121338.2-201ENST00000622535 1744 ntBASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV7-1A0A0A6YYK4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SLC7A5P2-201ENST00000553010 536 ntBASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC087623.3-201ENST00000607047 1098 ntBASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV7-1A0A0A6YYK4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 RARRES2P6-201ENST00000567333 442 ntBASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms