Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CECR2-201ENST00000262608 4783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 ADAM21P1-201ENST00000529267 2170 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 AC091825.1-201ENST00000622952 2621 ntBASIC9.24□□□□□ -0.93
SNX18Q96RF0 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 PTGES3L-201ENST00000409446 1781 ntTSL 2 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 ZNF830-201ENST00000361952 2246 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
SNX18Q96RF0 FRMD3-203ENST00000376434 1397 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 DNHD1-202ENST00000354685 3205 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SNX18Q96RF0 INPP5F-202ENST00000369080 2882 ntTSL 2 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 GCNT1-201ENST00000376730 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 CNRIP1-203ENST00000409862 1748 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AC136428.3-201ENST00000566387 1990 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 MT1G-201ENST00000379811 405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 LIPT1-201ENST00000393471 1289 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 OTX2-202ENST00000408990 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 MTND6P11-201ENST00000431890 483 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 ZNF816-205ENST00000438970 491 ntTSL 4 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 HNRNPA1P53-201ENST00000441603 946 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 AC009262.1-201ENST00000446484 510 ntTSL 3 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 COX5BP3-201ENST00000454627 367 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 TRAF3IP2-AS1-207ENST00000456352 484 ntTSL 5 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AC004080.3-201ENST00000470747 765 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 BNC2-207ENST00000471301 745 ntTSL 3 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AL627309.7-201ENST00000494149 755 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 TCL6-210ENST00000495696 789 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AL136018.1-201ENST00000557736 636 ntTSL 4 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 SRP14-205ENST00000559081 578 ntTSL 2 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 COX6CP1-201ENST00000564972 215 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 C17orf62-215ENST00000578913 563 ntTSL 2 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AC145207.7-201ENST00000580125 958 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 ZNF569-208ENST00000592490 579 ntTSL 3 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AP002383.6-201ENST00000616726 697 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 CD274-201ENST00000381573 3343 ntTSL 5 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AP003469.4-201ENST00000565617 2825 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AC015883.1-201ENST00000623054 2074 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 LMO3-224ENST00000540848 1574 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AC015961.1-201ENST00000589715 2124 ntBASIC9.23□□□□□ -0.93
SNX18Q96RF0 CHD2-207ENST00000626782 2131 ntTSL 2 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 CSF2RA-204ENST00000381509 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 SAMD8-204ENST00000542569 6782 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 KDM4C-201ENST00000381306 4601 ntTSL 2 BASIC9.23□□□□□ -0.93
SNX18Q96RF0 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SNX18Q96RF0 ARL6IP5-203ENST00000478935 1449 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 GLDC-211ENST00000639318 2009 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 LINC01281-202ENST00000448597 1773 ntTSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 GLI1-207ENST00000543426 3394 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 IFIT3-202ENST00000371818 2496 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AURKC-201ENST00000302804 1247 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC005342.1-201ENST00000354425 629 ntTSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 RN7SKP180-201ENST00000363913 330 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 LDLRAD1-202ENST00000371362 654 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SNX18Q96RF0 TRAV4-201ENST00000390426 395 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC093732.1-201ENST00000422201 504 ntTSL 3 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AL512288.2-201ENST00000426041 367 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 GOT2P3-201ENST00000426641 1289 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC073873.1-201ENST00000433950 276 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC112247.1-201ENST00000436268 657 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 TRBV22OR9-2-201ENST00000441373 136 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 ZFYVE9P2-201ENST00000447321 604 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AL133264.2-201ENST00000453179 555 ntTSL 4 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 RPSAP22-201ENST00000453567 851 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 LMCD1-205ENST00000454244 1113 ntTSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AL445220.1-201ENST00000456309 559 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC009245.1-201ENST00000456481 862 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 NPM1P8-201ENST00000458237 837 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AL121612.1-201ENST00000490252 615 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC106795.2-201ENST00000502514 613 ntTSL 5 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 FAM92A-204ENST00000517718 827 ntTSL 3 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AL161668.3-202ENST00000532213 469 ntTSL 3 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 CD59-214ENST00000534312 572 ntAPPRIS ALT2 TSL 3 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AP000763.1-201ENST00000539481 325 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC133561.3-201ENST00000568778 351 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 GEMIN8P2-201ENST00000569855 700 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 RN7SL377P-201ENST00000585039 278 ntBASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC090376.1-201ENST00000589845 616 ntTSL 2 BASIC9.22□□□□□ -0.93
SNX18Q96RF0 AC091044.1-201ENST00000591362 375 ntTSL 3 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms