Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KDM4C-201ENST00000381306 4601 ntTSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ZNF558-201ENST00000301475 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ZNF3-205ENST00000413658 1441 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ATG16L1-205ENST00000392020 3213 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 MAST4-221ENST00000490016 1950 ntTSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC073508.2-201ENST00000476049 2502 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 FAM239B-202ENST00000424415 2194 ntTSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 MAGEA10-201ENST00000244096 2741 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 LINC01702-201ENST00000230113 487 ntTSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 CTNNBL1-202ENST00000373469 1130 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 C4BPB-204ENST00000391923 949 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 RPS5P3-201ENST00000414617 616 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 SRP68P3-201ENST00000416871 344 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC114489.1-201ENST00000421619 395 ntTSL 3 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 RPP21-223ENST00000436442 522 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC093166.1-201ENST00000442243 330 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 LINC01598-202ENST00000445151 719 ntTSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AL157938.1-201ENST00000446606 559 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 MOBP-210ENST00000447324 566 ntAPPRIS ALT2 TSL 4 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AL592546.1-201ENST00000448834 692 ntTSL 3 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 SNRPCP13-201ENST00000505417 190 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC091917.3-201ENST00000509496 600 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 PTPN20-222ENST00000509774 788 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 PTPN20-226ENST00000513156 913 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC099730.1-201ENST00000525269 1177 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 LINC00609-201ENST00000546508 583 ntTSL 3 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ARL17A-204ENST00000570550 491 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ARL17B-204ENST00000571246 491 ntTSL 3 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ZNF702P-210ENST00000600425 880 ntTSL 3 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC121493.1-201ENST00000602316 450 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC233724.14-201ENST00000603531 331 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 LINC01954-201ENST00000607419 461 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AL157904.1-201ENST00000610171 383 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 RNASE9-211ENST00000611135 1108 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 Metazoa_SRP.133-201ENST00000612964 317 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 JPX_1.1-201ENST00000614715 135 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 RHOXF1P3-201ENST00000635058 502 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 LINC00342-202ENST00000448494 2351 ntTSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 MEIS2-206ENST00000424352 2917 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 PKNOX2-201ENST00000298282 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ZNF285-201ENST00000544719 2793 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 RNF31-211ENST00000559275 3198 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 EBF2-201ENST00000408929 1888 ntTSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 KCNA2-211ENST00000639233 5256 ntTSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC098850.5-201ENST00000602730 3243 ntTSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 PNPT1-205ENST00000447944 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AL136181.1-201ENST00000454484 1924 ntTSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC083836.1-201ENST00000519366 2125 ntTSL 5 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 NSRP1-201ENST00000247026 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ZC3H14-211ENST00000555755 2529 ntAPPRIS ALT1 TSL 2 BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 ASB11-202ENST00000380470 2748 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC061975.1-201ENST00000564762 2736 ntBASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 AC083805.1-201ENST00000499481 3507 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
NPIPA3F8WFD2 PGCP1-202ENST00000436252 1358 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 TSPAN2-202ENST00000369516 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 ADD2-205ENST00000413157 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 TBC1D14-202ENST00000410031 4201 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 TRIM10-203ENST00000376704 3007 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC112656.1-201ENST00000434972 1415 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 TTC27-201ENST00000317907 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 FLRT1-201ENST00000246841 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 C3P1-201ENST00000495140 3526 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 NDUFC2-203ENST00000527806 1888 ntTSL 2 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 WFIKKN2-201ENST00000311378 3588 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 C10orf53-202ENST00000374112 2130 ntTSL 2 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 SPACA7-202ENST00000375699 807 ntAPPRIS ALT2 TSL 3 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 GAPDHP63-201ENST00000405405 1007 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AL358473.2-202ENST00000415359 508 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC005301.1-201ENST00000423580 875 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC083822.1-201ENST00000438001 201 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AL683807.2-201ENST00000453953 548 ntTSL 2 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AL390726.2-201ENST00000504791 343 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 NUDT19P5-201ENST00000505620 569 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 NCBP2L-201ENST00000509000 660 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 DBI-208ENST00000535617 654 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC137056.1-201ENST00000574654 341 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 RN7SL44P-201ENST00000583849 302 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 RN7SL200P-201ENST00000585129 288 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC104532.2-201ENST00000591109 589 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 BRCA1-227ENST00000591849 563 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC098847.2-202ENST00000592549 959 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC134879.2-201ENST00000604178 389 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC013400.1-201ENST00000607190 545 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 U62317.2-201ENST00000609178 602 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC126283.1-201ENST00000609440 364 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 TRAC-201ENST00000611116 976 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 IGKV2D-29-202ENST00000612356 310 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC013553.4-201ENST00000619781 622 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC139768.1-201ENST00000620274 898 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 CLPS-203ENST00000622413 461 ntTSL 5 BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms