Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 KIF9-202ENST00000335044 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 HTR3C-201ENST00000318351 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 SLC25A14-214ENST00000545805 1650 ntTSL 5 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 ZNF615-202ENST00000391795 2698 ntTSL 2 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 CLASP2-202ENST00000333778 1989 ntTSL 2 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AC018647.2-201ENST00000605778 4200 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 KRTAP21-1-201ENST00000335093 599 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 LINC01560-201ENST00000357412 1253 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 SH2D1A-201ENST00000360027 593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 MIR370-201ENST00000362135 75 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 PDZD11-202ENST00000374454 784 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 RNVU1-17-201ENST00000384619 164 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 RPL15P14-201ENST00000416278 636 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AP000529.1-201ENST00000417657 1123 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AC022431.2-201ENST00000431789 536 ntTSL 4 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 LINC00843-202ENST00000444438 550 ntTSL 5 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 Z93930.1-201ENST00000447099 245 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AC096588.1-201ENST00000504537 558 ntTSL 3 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AP003692.1-201ENST00000521706 796 ntTSL 5 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 CD3E-204ENST00000528600 1289 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 HNRNPA1P76-201ENST00000529475 848 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AP002840.1-201ENST00000546284 524 ntTSL 3 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AL079352.1-201ENST00000547237 1042 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 C14orf2-210ENST00000555030 749 ntTSL 3 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AC013391.1-201ENST00000560477 459 ntTSL 3 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AC008555.4-201ENST00000605481 568 ntBASIC10.67□□□□□ -0.7
LMO3Q8TAP4 NOP16-208ENST00000616685 472 ntTSL 3 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AC012507.4-201ENST00000637275 504 ntTSL 3 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 AL138889.1-203ENST00000530000 6593 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 CFLAR-215ENST00000457277 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 LIMD1-AS1-201ENST00000427644 1536 ntTSL 3 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 PNLIPRP1-214ENST00000528052 1533 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 CAB39L-205ENST00000409308 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 IFT122-215ENST00000507564 3824 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 HARS-208ENST00000504366 3494 ntTSL 2 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 PKD1L2-202ENST00000337114 3427 ntTSL 5 BASIC10.67□□□□□ -0.7
LMO3Q8TAP4 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 DMD-206ENST00000361471 2224 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 FAM173B-201ENST00000280330 1928 ntTSL 2 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 MAP3K9-202ENST00000553414 3544 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 DHDDS-202ENST00000360009 3245 ntAPPRIS P4 TSL 2 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 KRTAP16-1-201ENST00000391352 1554 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 FMO6P-205ENST00000639957 1597 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 HPCAL4-202ENST00000612703 4436 ntTSL 2 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 MED22-208ENST00000610672 4367 ntAPPRIS P4 TSL 2 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 PARD6G-AS1-202ENST00000586421 3333 ntTSL 2 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 SPACA7-202ENST00000375699 807 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 LINC01643-201ENST00000412218 757 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC092810.1-201ENST00000429208 1224 ntBASIC10.66□□□□□ -0.7
LMO3Q8TAP4 SNX25P1-201ENST00000441817 834 ntBASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC007272.1-201ENST00000448256 1269 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC139887.1-201ENST00000454037 286 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC245595.1-202ENST00000457390 425 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 RPSAP38-201ENST00000475442 881 ntBASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC025752.1-201ENST00000503317 558 ntTSL 4 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC083906.3-201ENST00000509201 466 ntTSL 3 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 SUCLG2P4-201ENST00000514739 1027 ntBASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AP001652.1-201ENST00000531918 643 ntTSL 3 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC027237.2-201ENST00000558702 391 ntTSL 3 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC021818.1-201ENST00000561316 547 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 CMC2-207ENST00000564174 424 ntTSL 3 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC093330.1-205ENST00000580580 737 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 DMAC2-209ENST00000590641 1026 ntTSL 2 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 FXYD3-213ENST00000605552 837 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC243571.2-202ENST00000613901 575 ntTSL 4 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AC007603.2-201ENST00000623281 506 ntBASIC10.66□□□□□ -0.7
LMO3Q8TAP4 AL513327.1-204ENST00000630229 870 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 WDR37-202ENST00000358220 4582 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 TTC14-203ENST00000412756 4568 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 RASGRP1-206ENST00000558164 1757 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 HADHAP1-201ENST00000514498 2284 ntBASIC10.66□□□□□ -0.7
LMO3Q8TAP4 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 TTPAL-201ENST00000262605 6212 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 VPS11-207ENST00000620429 2739 ntTSL 5 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 NCF2-202ENST00000367536 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 PCDHGA1-201ENST00000378105 4069 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LMO3Q8TAP4 TROAP-206ENST00000547923 1652 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms