Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA11Q9Y5H2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA11Q9Y5H2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGA11Q9Y5H2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCDHGA11Q9Y5H2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDHGA11Q9Y5H2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGA11Q9Y5H2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 LINC01521-201ENST00000504184 1943 ntBASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA11Q9Y5H2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 YBX1P1-201ENST00000445822 960 ntBASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA11Q9Y5H2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGA11Q9Y5H2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA11Q9Y5H2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 AC008175.2-201ENST00000612840 297 ntBASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA11Q9Y5H2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 AP004607.4-201ENST00000530158 1459 ntBASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 POU5F1P4-201ENST00000413175 1085 ntBASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 ZNRF2P3-201ENST00000424200 374 ntBASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA11Q9Y5H2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA11Q9Y5H2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms