Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 AL117332.1-201ENST00000622628 974 ntBASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 AC087239.1-201ENST00000622671 572 ntBASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 AC018445.3-201ENST00000624177 1945 ntBASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 AC133637.1-201ENST00000624115 1537 ntBASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 TSPY9P-201ENST00000440215 945 ntBASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 TSPY11P-201ENST00000442607 1045 ntBASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 AC020907.5-201ENST00000624372 1936 ntBASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB1Q9Y5G3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 AL162377.1-201ENST00000618844 1793 ntBASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 AL139246.5-201ENST00000606645 996 ntBASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB1Q9Y5G3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGB1Q9Y5G3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 AL034346.1-201ENST00000568244 1277 ntBASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB1Q9Y5G3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB1Q9Y5G3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB1Q9Y5G3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB1Q9Y5G3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms