Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 IRS3P-201ENST00000223076 1006 ntBASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 MIR638-201ENST00000385237 100 ntBASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF11Q9Y3C5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF11Q9Y3C5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF11Q9Y3C5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RNF11Q9Y3C5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RNF11Q9Y3C5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF11Q9Y3C5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RNF11Q9Y3C5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RNF11Q9Y3C5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RNF11Q9Y3C5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF11Q9Y3C5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 EEF1DP3-203ENST00000566025 782 ntBASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF11Q9Y3C5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF11Q9Y3C5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF11Q9Y3C5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF11Q9Y3C5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF11Q9Y3C5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF11Q9Y3C5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RNF11Q9Y3C5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF11Q9Y3C5 AC053503.5-201ENST00000601508 636 ntBASIC20.24■□□□□ 0.83
RNF11Q9Y3C5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms