Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 AC092865.7-201ENST00000641832 219 ntBASIC19.7■□□□□ 0.74
LHX6Q9UPM6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 AC012676.1-201ENST00000574705 1949 ntBASIC19.7■□□□□ 0.74
LHX6Q9UPM6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.7■□□□□ 0.74
LHX6Q9UPM6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 Z99916.3-201ENST00000623422 1080 ntBASIC19.69■□□□□ 0.74
LHX6Q9UPM6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX6Q9UPM6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 PNMA6B-201ENST00000538162 1200 ntBASIC19.68■□□□□ 0.74
LHX6Q9UPM6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.68■□□□□ 0.74
LHX6Q9UPM6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 AL355075.4-201ENST00000554988 638 ntBASIC19.67■□□□□ 0.74
LHX6Q9UPM6 AL162412.1-201ENST00000567129 965 ntBASIC19.67■□□□□ 0.74
LHX6Q9UPM6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 AL591742.1-201ENST00000604433 565 ntBASIC19.67■□□□□ 0.74
LHX6Q9UPM6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX6Q9UPM6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 AC068473.5-201ENST00000616428 2072 ntBASIC19.66■□□□□ 0.74
LHX6Q9UPM6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX6Q9UPM6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LHX6Q9UPM6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms