Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLN6Q9NWW5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 KRT16P3-201ENST00000439127 1283 ntBASIC18.97■□□□□ 0.63
CLN6Q9NWW5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 AC121338.2-201ENST00000622535 1744 ntBASIC18.97■□□□□ 0.63
CLN6Q9NWW5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLN6Q9NWW5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 PCDHAC2-203ENST00000615316 3011 ntBASIC18.96■□□□□ 0.63
CLN6Q9NWW5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 MIR3181-201ENST00000578512 73 ntBASIC18.96■□□□□ 0.63
CLN6Q9NWW5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLN6Q9NWW5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 AC027702.1-201ENST00000563810 1770 ntBASIC18.95■□□□□ 0.62
CLN6Q9NWW5 AFG3L1P-217ENST00000557444 2447 ntBASIC18.95■□□□□ 0.62
CLN6Q9NWW5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.95■□□□□ 0.62
CLN6Q9NWW5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 AC020907.5-201ENST00000624372 1936 ntBASIC18.94■□□□□ 0.62
CLN6Q9NWW5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 AL356740.2-201ENST00000601559 647 ntBASIC18.94■□□□□ 0.62
CLN6Q9NWW5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLN6Q9NWW5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 RNF165-205ENST00000588679 2904 ntBASIC18.93■□□□□ 0.62
CLN6Q9NWW5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN6Q9NWW5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.93■□□□□ 0.62
CLN6Q9NWW5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.92■□□□□ 0.62
CLN6Q9NWW5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms