Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 AC090192.1-201ENST00000517740 490 ntBASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 RASA4CP-201ENST00000424092 1398 ntBASIC19.78■□□□□ 0.76
CCM2LQ9NUG4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2LQ9NUG4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCM2LQ9NUG4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 AC068587.7-201ENST00000641602 218 ntBASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.76■□□□□ 0.75
CCM2LQ9NUG4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 AC092171.4-201ENST00000609130 632 ntBASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 RARRES2P11-201ENST00000635158 484 ntBASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 AC027702.1-201ENST00000563810 1770 ntBASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.75■□□□□ 0.75
CCM2LQ9NUG4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 IRS3P-201ENST00000223076 1006 ntBASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 AC133637.1-201ENST00000624115 1537 ntBASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCM2LQ9NUG4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms