Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HINT3Q9NQE9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 ZNRF2P3-201ENST00000424200 374 ntBASIC18.79■□□□□ 0.6
HINT3Q9NQE9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
HINT3Q9NQE9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
HINT3Q9NQE9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HINT3Q9NQE9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HINT3Q9NQE9 AC121338.2-201ENST00000622535 1744 ntBASIC18.77■□□□□ 0.59
HINT3Q9NQE9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HINT3Q9NQE9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HINT3Q9NQE9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HINT3Q9NQE9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms